RNA id: TU122326



Basic Information


Item Value
RNA id TU122326
length 807
RNA type TUCP
GC content 0.47
exon number 6
gene id G82588
representative True

Chromosome Information


Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 17550581 ~ 17559836 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCTGGACCAGCATGACCGAGGCGATTTTTCCCGTCTTGTAGACTGACGTAACAATATTACAATGAAAGGATGCATTTTCTCGGGGCTTCATGAATGTCTCGGCGCTCGTATAGTCACCAGGGGGCATGCACACGTCAATGCAGCGCGGGAAACATTTTAACATCGTAACGTTGTAACGTCGGATCGGGGGAACGTTCGAATGGACGCAGGAGCAGCTCCGCGGCTCTTCATATCGCTGTAGTTTGTGTTACGGGAGGTTCCTGCTGCCCCCATCCATCTCTCCGGCTGTTGTTGTGAATTGATCTAACATGGCGACTGTACCCGTCTATTGCATCTGCAGATTACCTTACGACGTAACCCAGTTTATGATCGAATGCGACGCCTGCAAAGACTGGTTTCACGGCAGCTGTGTGGGAGTGGATGAAGATGAAGCACCAGATATTGACATCTATCACTGTCCTAACTGTGAAAAGACCCACGGCAAATCCACCTtgaaaaagaaaaagagctggAATAAGCATGACACGGGGCAAAGTGGAGACGTCAGACCGGTTCAAAATGGCAGTCAGGTGTTCATTAAAGAGCTGCGCAGCAGGACATTCCCCAGTTCAGAAGATGTGGTGGTCAAGCTGTCTGGAAGTCAGATGACGCTGGACTACCTTGAGGAAAACTATGTTGgaCCTGATGTTCTTGTGGATGTTGTCGATGTTAccaaacagacaaacagcaAGATGAAGTTAAAAGAATTTGTTGATTATTACTACagcacaaacagaaagaaagtaTTAAATGTGATCAACCTAGAGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU122314 lncRNA downstream 4506 17534848 ~ 17546075 (-) True G82582
XR_006252055.1 lncRNA downstream 74570 17465158 ~ 17476011 (-) True LOC122353733
TU122308 lncRNA downstream 102900 17447159 ~ 17447681 (-) True G82578
TU122159 lncRNA downstream 551715 16998661 ~ 16998866 (-) True G82496
TU122097 lncRNA downstream 638007 16906338 ~ 16912574 (-) False LOC122354244
TU122305 lncRNA upstream 2305 17562141 ~ 17563010 (-) True G82577
TU122354 lncRNA upstream 74967 17634803 ~ 17642527 (-) True G82606
TU122356 lncRNA upstream 75543 17635379 ~ 17642527 (-) False G82606
XR_006252135.1 lncRNA upstream 81200 17641036 ~ 17642527 (-) True LOC122354623
TU122371 lncRNA upstream 134083 17693919 ~ 17694508 (-) True G82619
XM_043251424.1 mRNA downstream 95807 17449267 ~ 17454774 (-) True LOC122353607
XM_043251678.1 mRNA downstream 366462 17096321 ~ 17184119 (-) True suclg2
XM_043252092.1 mRNA downstream 558311 16958903 ~ 16992270 (-) True lrig1
XM_043251397.1 mRNA downstream 658649 16889590 ~ 16891932 (-) True LOC122353589
XM_043252390.1 mRNA downstream 760871 16778912 ~ 16789710 (-) False LOC122354244
XM_043251657.1 mRNA upstream 18489 17578325 ~ 17590223 (-) True LOC122353782
XM_043252880.1 mRNA upstream 74970 17634806 ~ 17640897 (-) True LOC122354622
XM_043252881.1 mRNA upstream 75474 17635310 ~ 17640897 (-) False LOC122354622
XM_043252879.1 mRNA upstream 75529 17635365 ~ 17640897 (-) False LOC122354622
XM_043252830.1 mRNA upstream 122224 17682060 ~ 17692681 (-) True LOC122354584
TU122317 other downstream 10410 17537503 ~ 17540171 (-) False G82585
TU122319 other downstream 10410 17538383 ~ 17540171 (-) True G82585
TU121711 other downstream 2148890 15400918 ~ 15401691 (-) True LOC122354564
TU121487 other downstream 2315525 15234488 ~ 15235056 (-) False LOC122354561
TU121492 other downstream 2336523 15204961 ~ 15214058 (-) True G82067
TU122328 other upstream 13766 17573602 ~ 17576984 (-) True G82590
XR_006252134.1 other upstream 74970 17634806 ~ 17635665 (-) False LOC122354622
XR_006252133.1 other upstream 75529 17635365 ~ 17635664 (-) False LOC122354622
TU122389 other upstream 155023 17714859 ~ 17716567 (-) False LOC122354587
TU122586 other upstream 448529 18008365 ~ 18048123 (-) True tafa4b

Expression Profile