Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043252834.1 |
| length | 1062 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 3 |
| gene id | LOC122354587 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056709.1 |
| NCBI id | CM032078.1 |
| chromosome length | 24513629 |
| location | 17714752 ~ 17716696 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0009165 | nucleotide biosynthetic process | biological_process |
| GO:0004749 | ribose phosphate diphosphokinase activity | molecular_function |
| GO:0000287 | magnesium ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU122381 | lncRNA | downstream | 3946 | 17710451 ~ 17710806 (-) | True | G82628 |
| TU122371 | lncRNA | downstream | 20244 | 17693919 ~ 17694508 (-) | True | G82619 |
| TU122354 | lncRNA | downstream | 72225 | 17634803 ~ 17642527 (-) | True | G82606 |
| TU122356 | lncRNA | downstream | 72225 | 17635379 ~ 17642527 (-) | False | G82606 |
| XR_006252135.1 | lncRNA | downstream | 72225 | 17641036 ~ 17642527 (-) | True | LOC122354623 |
| TU122427 | lncRNA | upstream | 26220 | 17742916 ~ 17758425 (-) | False | LOC122353787 |
| XR_006252085.1 | lncRNA | upstream | 102206 | 17818902 ~ 17819459 (-) | True | LOC122354075 |
| TU122464 | lncRNA | upstream | 102220 | 17818916 ~ 17819424 (-) | False | LOC122354075 |
| TU122465 | lncRNA | upstream | 103599 | 17820295 ~ 17820891 (-) | False | LOC122354073 |
| XR_006252060.1 | lncRNA | upstream | 396652 | 18113348 ~ 18122237 (-) | False | LOC122353822 |
| XM_043252830.1 | mRNA | downstream | 22071 | 17682060 ~ 17692681 (-) | True | LOC122354584 |
| XM_043252831.1 | mRNA | downstream | 25863 | 17682060 ~ 17688889 (-) | False | LOC122354584 |
| XM_043252880.1 | mRNA | downstream | 73855 | 17634806 ~ 17640897 (-) | True | LOC122354622 |
| XM_043252881.1 | mRNA | downstream | 73855 | 17635310 ~ 17640897 (-) | False | LOC122354622 |
| XM_043252879.1 | mRNA | downstream | 73855 | 17635365 ~ 17640897 (-) | False | LOC122354622 |
| XM_043251658.1 | mRNA | upstream | 40673 | 17757369 ~ 17771610 (-) | True | LOC122353787 |
| XM_043252067.1 | mRNA | upstream | 85697 | 17802393 ~ 17805778 (-) | False | LOC122354069 |
| XM_043252066.1 | mRNA | upstream | 85697 | 17802393 ~ 17805778 (-) | True | LOC122354069 |
| XM_043252069.1 | mRNA | upstream | 93224 | 17809920 ~ 17813328 (-) | True | LOC122354072 |
| XM_043252071.1 | mRNA | upstream | 103577 | 17820273 ~ 17820936 (-) | True | LOC122354073 |
| XR_006252134.1 | other | downstream | 79087 | 17634806 ~ 17635665 (-) | False | LOC122354622 |
| XR_006252133.1 | other | downstream | 79088 | 17635365 ~ 17635664 (-) | False | LOC122354622 |
| TU122328 | other | downstream | 137768 | 17573602 ~ 17576984 (-) | True | G82590 |
| TU122326 | other | downstream | 154916 | 17550581 ~ 17559836 (-) | True | G82588 |
| TU122317 | other | downstream | 174581 | 17537503 ~ 17540171 (-) | False | G82585 |
| TU122586 | other | upstream | 291669 | 18008365 ~ 18048123 (-) | True | tafa4b |
| unassigned_transcript_1804 | other | upstream | 853680 | 18570376 ~ 18570448 (-) | True | trnav-aac_24 |
| unassigned_transcript_1806 | other | upstream | 854455 | 18571151 ~ 18571223 (-) | True | trnav-aac_25 |
| TU123313 | other | upstream | 2450609 | 20167305 ~ 20171305 (-) | True | G83230 |
| TU123804 | other | upstream | 3113100 | 20829796 ~ 20839292 (-) | True | G83592 |
