RNA id: TU122621



Basic Information


Item Value
RNA id TU122621
length 823
lncRNA type sense_over
GC content 0.39
exon number 3
gene id mustn1b
representative False

Chromosome Information


Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 18135884 ~ 18137388 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ataagagagagagagaggggggatgGGGTTACACTGAGCTCGTAACAAGGGTATAAAAGGGCCAGGACGAAAAGAAGACAAAGTACACAAGGCGCCAACTTGTCCAGAAACCAGACCTGCAAACATACATAATGTCTCAGAgattaagaagaagaagaggccAGTTGTAAAGGAGGAGGACCTGAAAGGAGCCCGCGGCAAACTTGGTCTGAAGGGAGAGGTCAAGAGCAAAACATATGAGGTCATGGTTGAGTGTGAACGCATGGGGAAGGTGGCGCCGTCTGTTTTCAGTGGAGCTCGATCTGGACGCGAGACAGTGCTTGAGAAACCCAAGACTCCATCAGGAAGCGTGTTTGGCAAATGAGTGCAGAATGGACAAATGGACTCTCGGTTTTAAATGTATGTCCATGAGCACACAGAGTTCTGTTTTGGCATCCACATcatgaattaaattataatttagatAATTACGTTGCATATTTGTATGTGTAATTAAgtatgtgtaatttttttatactgtttgTTGTTGCTAAACAtgatgcacttaaaaaaaaaacttgtttctaGTATCAcgttttctataataataaatttctAAAAGTGTCTCTGAGTCATCAGGTTTGGTTTCTCCGTTGAAAATCCTATAAGGATGGCGGTTTAGAACATTCTTGAGATGTTTTAACATCACCGGTAAAGCGACTCCTACAATTGCATGGTGTTTTGTCAGGGATATTGGATATCAGCTTACAAAGTGAAAAACATGTAAGTCCAGctgtaaattaatttcatgtttttctgaatttaataaatgaaaatcttcATA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU122603 lncRNA downstream 2754 18125988 ~ 18133130 (-) True G82753
XR_006252060.1 lncRNA downstream 13647 18113348 ~ 18122237 (-) False LOC122353822
XR_006252059.1 lncRNA downstream 13647 18118765 ~ 18122237 (-) True LOC122353822
TU122465 lncRNA downstream 314993 17820295 ~ 17820891 (-) False LOC122354073
XR_006252085.1 lncRNA downstream 316425 17818902 ~ 17819459 (-) True LOC122354075
TU122680 lncRNA upstream 60456 18197829 ~ 18198369 (-) False fgd5a
TU122681 lncRNA upstream 60456 18197829 ~ 18198339 (-) False fgd5a
TU122892 lncRNA upstream 472351 18609724 ~ 18610059 (-) True G82918
TU122908 lncRNA upstream 526048 18663421 ~ 18664517 (-) False G82932
TU122910 lncRNA upstream 526048 18663421 ~ 18664566 (-) True G82932
XM_043252430.1 mRNA downstream 28538 18099295 ~ 18107346 (-) False qrich1
XM_043252429.1 mRNA downstream 28538 18099295 ~ 18107346 (-) False qrich1
XM_043252427.1 mRNA downstream 28538 18099295 ~ 18107346 (-) True qrich1
XM_043252428.1 mRNA downstream 28539 18099295 ~ 18107345 (-) False qrich1
XM_043252419.1 mRNA downstream 41123 18086775 ~ 18094761 (-) True twf2b
XM_043251867.1 mRNA upstream 6480 18143853 ~ 18153168 (-) False stimate
XM_043251866.1 mRNA upstream 6480 18143853 ~ 18153166 (-) True stimate
XM_043252617.1 mRNA upstream 16712 18154085 ~ 18172225 (-) True sfmbt1
XM_043252482.1 mRNA upstream 36272 18173645 ~ 18192786 (-) True prkcdb
XM_043252277.1 mRNA upstream 60486 18197859 ~ 18231521 (-) False fgd5a
TU122586 other downstream 87761 18008365 ~ 18048123 (-) True tafa4b
TU122389 other downstream 419317 17714859 ~ 17716567 (-) False LOC122354587
XR_006252134.1 other downstream 500219 17634806 ~ 17635665 (-) False LOC122354622
XR_006252133.1 other downstream 500220 17635365 ~ 17635664 (-) False LOC122354622
TU122328 other downstream 558900 17573602 ~ 17576984 (-) True G82590
unassigned_transcript_1804 other upstream 433003 18570376 ~ 18570448 (-) True trnav-aac_24
unassigned_transcript_1806 other upstream 433778 18571151 ~ 18571223 (-) True trnav-aac_25
TU123313 other upstream 2029932 20167305 ~ 20171305 (-) True G83230
TU123804 other upstream 2692423 20829796 ~ 20839292 (-) True G83592
XR_006252084.1 other upstream 3090969 21228342 ~ 21349094 (-) False kaznb

Expression Profile