RNA id: XM_043251733.1


Basic Information

Item Value
RNA id XM_043251733.1
length 2953
RNA type mRNA
GC content 0.50
exon number 18
gene id mfn1b
representative True

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11795535 ~ 11811706 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCGTTTccgggacttttattttgaagtggtCGAGATTGAGCGTCTGCAGCGAGTGTGTTTGTCATGACAGGAGAGGATTTAACGTTCCCGTGATCAGGTGTTGAAATGGACCGGTCCGATCCTTCTCCGCTGAAGCGCTTCGTTCAGGCCAAAAAGAAGATCGGCGAGGTTTTCGAGCAGCTCCTGGTTTACGTTCAGGAGGGGACGGAGTTTGTAAAAGAAACCTGCAATAATGAGTCGCTGGAGAACATCGCCAACGAGCCCCAGCTGGATCAGATCCAGGCTTACATGAGCAAGCTCTCCGAAATTAAAGAGGTTTTAGCTCGCAATTACATGAAGGTGGCCTTTTTCGGCAGAACAAGCAACGGAAAAAGCACGGTGGTCAACGCCATGCTGCGGGACCGAGTGCTGCCCAGCGGCATCGGCCACACCACCAACTGCTTCCTGAGCGTGGAGGGGACCGACGAAGACAAGGCCTTCCTCAAGACCGAAGGCTCCGAGGAGGAGAAGAGCATCAAGACGGTGAATCAGTTGGCTCACGCACTACATATGGACGAGAGTCTGGACGCCGGGTGTCTGGTCAAAGTGTTCTGGCCCAAAACGAAGTGTGCTCTGCTCAGAGACGACCTGGTTCTGGTGGATAGTCCTGGCACGGACGTCACCACGCAGCTGGACAGCTGGATCGATAAGTTCTGTCTGGACGCGGATGTGTTTGTGCTGGTGGCCAACTCCGAATCTACTCTCATGAACACGgagAAGCACTTCTTCCACAAGGTCAATGAACGCCTGTCAAAGCCCAACATCTTCATCCTGAACAACCGCTGGGACGCTTCTGCCGCTGAACCCGAGTACATGGAGGACGTGAGGAAGCAGCACACGGACAGGTGCGTGAACTTCCTGGTGGAGGAGCTGAAGGTGGTGGATCGCGCTCAAGCCCCGAACCGGATCTTCTTCGTCTCGGCGAAGGAGGTGCTGAACTCCCGGATGCAGCGGGCGCAGGGTATGCCAGAGACGGgAGGAGCTTTAGCTGAAGGCTTTCAGGAGCGACTGAAGGAGTTCCAGAACTTTGAGAGATCCTTTGAGGAGTGTATCTCGCATTCAGCAGTGAAAACAAAGTTTGAGCATCACACAATCAGAGCAAAGCAGATCACAGAAACGGTCAAAGACATCATGGATCACATCAACATCGCCGCCGCGGAGAAGAGGGTGGTTTCTCTGGAAAAGAGGGAGTATCTGATCGACCGGCTGGATTTCGTTCGCAATCAACTCAACCTGCTCATCCAGGACATCAAGAAGAAGATCGAGGCCATCACAGAAGAGGTCAAAGACAAGGTGTCAGACGCGATGGCAGAAGAGATCTGTCGTCTGTCTGTGCTCATAGACGAGTTTCATGCAGATTTCCATCCGTCACCACACGTGCTCAAAATCTACAAATCTGATCTTCTGACCCACATCGAGAAGGGCATGGGCAAGAATCTGGCCTTCCGCTGTTCTGATGCAGTGAACGCCTCCGTTCAGTCGTCTCAGCAAGACATGATGGAGTGTCTGAAGCctctgctgccctctgctgcccAGAGCCAGCTCCACATGCTCATTCCCAGCAGGAAGTTTGAGCTCAGCTACGACCTCAACTGTGCCACGCTCTGCTCAGACTTCCAGGAGAACATCGAGTTCCAGTTCTCTTTGGGCTGGACTGCGCTGGTCCACCGCTTCCTAGGTCCAGTCAACGCCAAACGCGCCTTGATGCTTGTGGATCAGACTCTACCGCTGACGGCGCCGACCACCCCTTCGGCCCCAGCGGTGGTTCAGTCTCAGGTTCCTAGAGCTCAAGGTCAGAATCAGCACTCACAGACACAGGAAGAGCTCATGATGTCCGTGGTGAGCAACCTGGCCTCGGTCACCTCCCGCACGTCTATGAGCGTGATCATCGTTGGAGGAGTGGTGTGGAGAACCGTTGGCTGGCGTCTGATCGCTCTCTCCATGAGTCTGTACGGCACACTCTACCTGTACGAAAGACTCACCTGGACCACCAAGGCCAAGGAAAGAACCCTGAAGAAACAGTTTGTGGATTACGCCACCGAGAAACTTCAAATGATCATCAGTTTCACCAGCTCAAACTGCAGCCACCAAGTACAGCAAGAAATCGCGAGTACATTCGCTCGACTCTGCCAGCAAGTGGACATCACCCAGAAGGACCTGGAGAAGGACATCCAGCGCCTCACCGACAAGATCCAGAAGCTGGAAACCGTACAGAACCGATCCAAAGCGCTCAGACATAAAGCCACGGCTCTGGAAAAGCAGTTGGAGGATTTCAGCTCCCAGTATCTTCGTCATCAACCCTGACTCGGACACTCGGCTCCTTCCAGAGAGTGACGTAACTCCTGAAATACTGTACACTCTCCCGTTACGCCCTGCTGTTTTGGGAATTCTCGACTCGCCAGATGTTGCGAGGAATGCAAGGGGAAAAAATGTTACTTGTAAAATTGGGATTCTTGAACGAAAGCTGGTTTCAGTGCTATGTTTTGGTCGAGGTTTTTCTGTACAGAGATCGTCACttgaacttaatttaaaaaaacaaaacaaaacactacttTGTGAACTGTGAAACTGCCCTGctaagtaaaacaaaaagctgGAATTTGAAAATGGAGTTCGTTTTGCTTGTCAGGTTCAGCCTAATGAAGGAGTCAAACTTTATTTACTAATAGCCAGCCTTTTTCACAGAGcctttttattcagaaacagTTTCCCGTCAACAGACAGGTAATTCAAATTTTGTAGGTTTGCCTTTTGATCACAAAGCCTATTTTATATGTGTTCCTTGGTAGCTGTTTGAATCAATATAACCCAGTGTTAAAATTCTTTTCATGAACTGTTATTTCTAAAcgtatgtaaatgtaataaccTGAAAATAAGTTTCTcctgtgtaataaaaatgaaaatataataaaaa

Function

GO:

id name namespace
GO:0006184 obsolete GTP catabolic process biological_process
GO:0008053 mitochondrial fusion biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005741 mitochondrial outer membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K21356 MFN1; mitofusin 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU119635 lncRNA upstream 20413 11774726 ~ 11775122 (+) True G80889
TU119568 lncRNA upstream 29481 11741614 ~ 11766054 (+) False G80847
TU120014 lncRNA downstream 39339 11851045 ~ 11857319 (+) False shroom2b
TU120141 lncRNA downstream 393462 12205168 ~ 12225492 (+) True G81213
TU120168 lncRNA downstream 423486 12235192 ~ 12236177 (+) True G81234
TU120167 lncRNA downstream 423882 12235588 ~ 12236177 (+) False G81234
TU120170 lncRNA downstream 426112 12237818 ~ 12238356 (+) True G81236
XM_043251737.1 mRNA upstream 1438 11782659 ~ 11794097 (+) True si:ch1073-365p7.2
XM_043251738.1 mRNA upstream 8818 11782659 ~ 11786717 (+) False si:ch1073-365p7.2
XM_043252113.1 mRNA upstream 80184 11706108 ~ 11715351 (+) True tbce
XM_043252115.1 mRNA upstream 80184 11706108 ~ 11715351 (+) False tbce
XM_043252114.1 mRNA upstream 80184 11706108 ~ 11715351 (+) False tbce
XM_043251723.1 mRNA downstream 16172 11827878 ~ 11852453 (+) True shroom2b
XM_043251727.1 mRNA downstream 16172 11827878 ~ 11852453 (+) False shroom2b
XM_043251726.1 mRNA downstream 16172 11827878 ~ 11852452 (+) False shroom2b
XM_043251724.1 mRNA downstream 16172 11827878 ~ 11852449 (+) False shroom2b
XM_043251725.1 mRNA downstream 16172 11827878 ~ 11852446 (+) False shroom2b
TU119601 other upstream 95321 11698364 ~ 11700214 (+) False tomm20b
TU119538 other upstream 122597 11580026 ~ 11672938 (+) False LOC122354243
TU119539 other upstream 134593 11580026 ~ 11660942 (+) True LOC122354243
TU119513 other upstream 265899 11528734 ~ 11529636 (+) False eif4a3
TU119512 other upstream 268493 11525059 ~ 11527042 (+) True rpl37a
TU120019 other downstream 49236 11860942 ~ 11863112 (+) False LOC122353892
TU120138 other downstream 381048 12192754 ~ 12225492 (+) False G81213
TU120140 other downstream 395049 12206755 ~ 12225492 (+) False G81213
TU120139 other downstream 399246 12210952 ~ 12225492 (+) False G81213
TU120226 other downstream 771209 12582915 ~ 12585641 (+) True G81268

Expression Profile