Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043251771.1 |
| length | 1262 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 2 |
| gene id | LOC122353880 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056709.1 |
| NCBI id | CM032078.1 |
| chromosome length | 24513629 |
| location | 12169468 ~ 12171898 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006032 | chitin catabolic process | biological_process |
| GO:0046549 | retinal cone cell development | biological_process |
| GO:0001754 | eye photoreceptor cell differentiation | biological_process |
| GO:0042462 | eye photoreceptor cell development | biological_process |
| GO:0046348 | amino sugar catabolic process | biological_process |
| GO:1901072 | glucosamine-containing compound catabolic process | biological_process |
| GO:0060219 | camera-type eye photoreceptor cell differentiation | biological_process |
| GO:0060042 | retina morphogenesis in camera-type eye | biological_process |
| GO:0042670 | retinal cone cell differentiation | biological_process |
| GO:0006026 | aminoglycan catabolic process | biological_process |
| GO:0008289 | lipid binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU120083 | lncRNA | downstream | 214398 | 11898871 ~ 11955070 (-) | True | G81165 |
| TU120092 | lncRNA | downstream | 228583 | 11939282 ~ 11940885 (-) | True | G81174 |
| TU120089 | lncRNA | downstream | 231040 | 11934065 ~ 11938428 (-) | True | G81171 |
| TU120064 | lncRNA | downstream | 291819 | 11875488 ~ 11877649 (-) | True | G81158 |
| TU119981 | lncRNA | downstream | 382480 | 11784280 ~ 11786988 (-) | True | G81097 |
| TU120166 | lncRNA | upstream | 62501 | 12234399 ~ 12234936 (-) | True | G81233 |
| TU120169 | lncRNA | upstream | 63704 | 12235602 ~ 12236175 (-) | True | G81235 |
| TU120171 | lncRNA | upstream | 65911 | 12237809 ~ 12238334 (-) | True | G81237 |
| TU120253 | lncRNA | upstream | 198642 | 12370540 ~ 12372623 (-) | True | G81295 |
| TU120304 | lncRNA | upstream | 311345 | 12483243 ~ 12523584 (-) | True | G81327 |
| XM_043251750.1 | mRNA | downstream | 7625 | 12150736 ~ 12161843 (-) | True | LOC122353860 |
| XM_043251728.1 | mRNA | downstream | 110152 | 11982436 ~ 12059316 (-) | True | gli2b |
| XM_043251753.1 | mRNA | downstream | 277276 | 11884558 ~ 11892192 (-) | False | traf3ip2b |
| XM_043251752.1 | mRNA | downstream | 277278 | 11884558 ~ 11892190 (-) | True | traf3ip2b |
| XM_043251762.1 | mRNA | downstream | 310313 | 11856339 ~ 11859155 (-) | True | LOC122353870 |
| XM_043251755.1 | mRNA | upstream | 173641 | 12345539 ~ 12347685 (-) | True | foxg1b |
| XM_043251731.1 | mRNA | upstream | 405121 | 12577019 ~ 12594787 (-) | True | tdrd3 |
| XM_043251763.1 | mRNA | upstream | 431768 | 12603666 ~ 12604703 (-) | True | LOC122353872 |
| XM_043251778.1 | mRNA | upstream | 435338 | 12607236 ~ 12609732 (-) | True | zgc:194981 |
| XM_043251734.1 | mRNA | upstream | 440926 | 12612824 ~ 12659684 (-) | True | il17rd |
| TU120112 | other | downstream | 95393 | 12073596 ~ 12074075 (-) | True | G81192 |
| XR_006252156.1 | other | downstream | 268370 | 11900968 ~ 11901098 (-) | True | LOC122354705 |
| XR_006252062.1 | other | downstream | 388659 | 11766831 ~ 11780809 (-) | False | ero1b |
| TU119760 | other | downstream | 750138 | 11403644 ~ 11419330 (-) | True | G80956 |
| TU119843 | other | downstream | 774592 | 11393360 ~ 11394876 (-) | False | LOC122354635 |
| TU120285 | other | upstream | 273962 | 12445860 ~ 12447287 (-) | True | G81318 |
| TU120624 | other | upstream | 646224 | 12818122 ~ 13057881 (-) | False | G81512 |
| TU120651 | other | upstream | 718383 | 12890281 ~ 12896130 (-) | False | G81523 |
| TU120652 | other | upstream | 720695 | 12892593 ~ 12896130 (-) | True | G81523 |
| XR_006252063.1 | other | upstream | 784963 | 12956861 ~ 12965633 (-) | False | LOC122353859 |
