RNA id: XM_043251914.1


Basic Information

Item Value
RNA id XM_043251914.1
length 1967
RNA type mRNA
GC content 0.47
exon number 9
gene id elovl1b
representative True

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 14488377 ~ 14511622 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCAGTTTTCACTCCGAAGCGCTGAAGACATGTTAGGTGCTATTTAAGAGAAGCCGACGTTGTTGCTTTAGAGCAGATGTTGGGCGGCAGGGAGGCAGAGCTGTTTGTTCATGTGAGGCCTTGAGTTCAGTCGGGACACAGATCTGTGATAAGAGCCGATTCCGCTTCCTCCATCCGTGCAGTCCGCTGTATAAACCCAGCGGCAAAGCCGAGGCGCTGATATATTCGGTGTAGGCGACCGAGCGTTTCATGAAGGTTAATGGGAGGCAGGCATTACCTCACTGGGGCCGTTCCACTCCCTTCTGCAGCCACACCTCCAACATCACACCATATCAGCCAAGATGGGAAGAACACATGGAGGAGGGAAAGAGGGAGACGGAAAACGATAAAGAAACTGAATTtgGTGCTTTTTGTGTAGCTGAACGTGAAGCTGACGTCAGTAAAAATGCTGGAGACGGTGAAAGACAGAGTACTGGAGGTCTATGACAGCCTCTTATCAGGAAGAGACCCGCGGGTGAAGGGTTACCTGCTAATGGAGAGTCCAGTCAACATGACCGCTGTCCTGCTTGCTTATCTTTTCTTCGCACTGTACGCTGGCCCCAGGTTTATGGCCAACCGCAAACCCTTCCAACTGAAAGAAGCTATGATCGTCTACAACCTGTCCTTGGTTGGCCTGTCTGCATATATCGTATACGAGTTCTTGATGTCGGGTTGGGCGACGGGATACACGTGGAGATGCGACCCGTGCGATTATTCAAACAGCCCTCAAGGACTCAGAATGACACGAGTTGCCTGGTTGTTTCTGTTTTCGAAGTTCATTGAGCTTATGGATACGGTGTTTTTTGTGCTGCGTAAGAAACACAGTCAGATCACCTTCCTGCACATCTTCCACCATTCCTTCATGCCCTGGACGTGGTGGTGGGGCGTGAGCTACGCACCAGGTGGAATGGGCTCCTTCCATGCAATGATCAACTCGTGCGTCCATGTGATCATGTACTTCTACTACGGCCTTTCTGCTGCAGGACCTCGCTTCCAGAAGTTCCTCTGGTGGAAGAAATACATGACTGCAATTCAGCTGACTCAGTTTGTGCTAGTGTCTCTTCACGCAACCCAGTGGTACTTCATGAAGAGCTGCGACTACCAGGTTCCTCTGTTCATCCACCTCATCTGGATGTACGGGACCTTCTTCTTCGTGCTGTTCTCTAACTTCTGGTACCAGGCGTACGTGAAGGGCAAGAGGCTCCCGAAGAACACCCAACAGCTCGCCCAGAACAAAACGGCCAAAGGATCCACCACAGTCGCCAACGGCTCCTCCGCGGTTTCAAACGGCCACGGAGTGCACGAAAACGGCCTGAGCAACGGTAAGAAACACCACGAGAACGGAAGTAGTCACAACGGCAAGATGAAGAAAGCCTGAGGGGCTCAGAAAGAGAAGACCCAAAACGGATGACCAGGAGAACCTGTACTAAGCACTATGGAGTCCAAAGAGTGTTTTGGGACTTTtcgtttttttcaaatgttcaaatgcgtttttgttttgttttttttaatatgtacatttaaataagtaaatgggGATCTGAATCCATCTGACCCTGTTtgtaaatgggttttttttttttgtcgtaaATTAATCTAAAGAATAATTATTGAGCACGATGTAtgaagagaagaggaagagtaTTGACCGGATCCATCCTCCGCTGATGTTGCTCATGGTGTTCATTTCAACAGAATGAATTCACagatgagcacacacacacacacccacacccgtgtgtgtgtgtgtgtgtgtgtgtgtgtttcatacTCCCCCCCCCCCCAATTGCAGACACTGTACAGCCAACATCAGTAAACTTGAATTACACCTGTAAATAGTTTTACCTTATAAACTAACGGGATTGatgcggtaaaaaaaaaattgttagtcTTGAAttgaatacaaaaaataaattcaattttaaaata

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K10247 ELOVL1; elongation of very long chain fatty acids protein 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU121177 lncRNA downstream 3476 14484503 ~ 14484901 (-) True G81872
TU121182 lncRNA downstream 4446 14483496 ~ 14483931 (-) True G81877
TU121181 lncRNA downstream 4946 14483019 ~ 14483431 (-) True G81876
TU121180 lncRNA downstream 5798 14482160 ~ 14482579 (-) True G81875
TU121179 lncRNA downstream 8948 14479197 ~ 14479429 (-) True G81874
TU121197 lncRNA upstream 32317 14526113 ~ 14527527 (-) True G81882
TU121198 lncRNA upstream 34834 14528630 ~ 14529449 (-) True G81883
TU121199 lncRNA upstream 36829 14530625 ~ 14531429 (-) True G81884
TU121206 lncRNA upstream 47964 14541760 ~ 14544078 (-) True G81890
TU121207 lncRNA upstream 47964 14541760 ~ 14544078 (-) False G81890
XM_043251518.1 mRNA downstream 36637 14443323 ~ 14451740 (-) False chrna4b
XM_043252080.1 mRNA downstream 96933 14382027 ~ 14391444 (-) False txlng
XM_043252081.1 mRNA downstream 97138 14382027 ~ 14391239 (-) True txlng
XM_043252082.1 mRNA downstream 97315 14382027 ~ 14391062 (-) False txlng
XM_043252458.1 mRNA downstream 114896 14367171 ~ 14373481 (-) True zrsr2
XM_043252324.1 mRNA upstream 66105 14559901 ~ 14589170 (-) False mast3b
XM_043252323.1 mRNA upstream 66105 14559901 ~ 14589170 (-) False mast3b
XM_043252320.1 mRNA upstream 66105 14559901 ~ 14589170 (-) False mast3b
XM_043252319.1 mRNA upstream 66105 14559901 ~ 14589170 (-) True mast3b
XM_043252322.1 mRNA upstream 66105 14559901 ~ 14583566 (-) False mast3b
XR_006252040.1 other downstream 36637 14442601 ~ 14451740 (-) True chrna4b
TU121063 other downstream 560897 13856300 ~ 13927480 (-) False G81799
TU121103 other downstream 601112 13885683 ~ 13887265 (-) True G81829
TU120846 other downstream 788419 13698099 ~ 13699958 (-) True G81650
TU120873 other downstream 878773 13606497 ~ 13609604 (-) False G81666
TU121170 other upstream 40922 14534718 ~ 14536392 (-) True G81866
TU121492 other upstream 711165 15204961 ~ 15214058 (-) True G82067
TU121487 other upstream 740692 15234488 ~ 15235056 (-) False LOC122354561
TU121711 other upstream 907122 15400918 ~ 15401691 (-) True LOC122354564
TU122317 other upstream 3043707 17537503 ~ 17540171 (-) False G82585

Expression Profile