RNA id: XM_043252782.1


Basic Information

Item Value
RNA id XM_043252782.1
length 7528
RNA type mRNA
GC content 0.46
exon number 12
gene id gpr179
representative False

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 15267975 ~ 15282844 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTGTTGAATCTCAGAACCCTGTTGCCATGGCACCAAAACAAGGATTCGCCTGCATTACCCGGTATGACTGGATTTGTCTGaatcatctttctctctctctctctctcacacacacacacacacacacacatctgacagACGTTCATTCATGTATAACACATATGGAACatgttttcttcttcctttattttctaatttcCCTGATTGTTGCACTAAACACTTGGCGGTCCAGAACGCAGTCCGTCTATCCGAGATTAACATTTCAGTGCACTTTATCTGTCAGGCAGATGCAGACTTGTAAACCGCCGCGTGCACATATTCACAGATGCACAAAGTCGCACGCACATACACAGTCCGTAAAAGACCACTCATGACTGACCCAGCCGGGGAATGCTGGGTTAATCCACAAAGCGGTGAGATTCTGATGCATACCCCAACAGAGAGGATTACCCTCCCATCCTCTCATCCATCAGCCCATCCTCATGCACATACACTCATCATAACAATCCAACATTAACAGATGTGCCACTCTCAGAGCTCACCACTACCGGGAGATTGGGAGAGATGGGAGAGAGGGACAGATTTGGAGAGCGAGTGAACAGCATCTAGGGTGGACCCGACCGACTGATCGCAATGGAGTTTAAGCATGGCCTCCTTCACCTTCAAAAATGAATAGTCGGTCTGTGCATGAATGCATGCTTACTTGTCTGTGAAATCGAGAACTCTATCAGCACTGACACCTGTCAATCAGCTTACAACAAGAGGAGAGAAGAAACAAATCCAGGGATAGAGAAGACAAGAAGGCTAAGTGTCTTTCAGGATGTGAGACAGCACAAAGATGATCTTTACTTTCACAAAAAGCATTGGAGGAGCACTTGCTTCAAGGATGGGCCGGTGTGTTGGACTACTACCTCTGCTGCTGCTACTTCCCAACCTGCTCTCTGCTCAGACCACCACTGTGTTTGAACTTGAAGACACGTCCAGCTTGGAGATCACCCCAACACCTTGTCCCACTGACCTAAATACCGTAGCAGGAAAGAGCTCGTCTACCAGTGCTCGACCCACCAGTCCAGTAAAAGCGATCACGGAGGAGGACCAGTCTGCCGCGGAGAGCTACCTCTACACTGGCAATTCATCTACTTTGGCTGCCTCTACATGCACAAAGAGTTTCCAGCTGCCTGTTCGACTGGGATCTCCGCCTAGAGACCTTCTCCCTCTCTTGCACCAAGCCATAGCATCTCTGACCAATGCTGCCAACTTTCTCAACCTGATATTCCAAGCTAGTGAGCTGAGGGAAACCAGTGTACGAGAGGACATCGAGTGGTACCATGCACTGGTGCGGGCCATGCTCGAAGGAGACAGGCCGGGCCTAGTCAGACGAGCTTTTCTAACATTCGACGCTGACCCCACGATCCAACAGCCGCAGCTGGTGCTCCGTGCCTCCAAAGGCACAACCCAAGACATTCTTCTGCAGGACCTGACATCCGCCTGGAGCAGCTTTCGTCCTCCTGCTCCTGACCAAAGCTGGTTTGATATGTTTAAGTCCAGCGCTCCACCCCTCCATGCCTTGTCGAAACGGGTTCTTCTAAATGACCTAAGCACCCTAGACACTCCCAAGTGGGCACGTGGAGATAGTTATGTGATCAATAGCAGTGGGGTTCAGTGGGGCGAAGCCCCTTTCCTTGAGTGCGTTGATGGCCGTTTTTTGCCAGGATGGCTACTTAGTCTTTCAATGCCATTTTATGGGTTGAAGCCAGACCTAAACCCAGAATTCAGGGGTGTTATCCGTGTCGACGTCAACATCCAGGGATTCAATGTGGATCAGTGTGCCAGTGGAGACTTCTGGTTTTCAAACACACATCAATGTAATCGGACCAGCATGGAGTGTGAATCCATCCCTCAACAGGGCTTCCGGGTGGGTCAGTACTGCTGCCGATGTAAAAAGGGCTACTACAGTCCAAATCCAGACACGGAAAGCAAAAGGAACAACAGTATGAACAGTACCCGAGCTTGTTACCCAGATGTCCCAGTGTGTCTGCCCTGTTGGGCCGGCTGTGATGAGTGTGAGGATGGAGCTCCATGTTGGGTGCAGGAAGACTGGCTCCTGAGGACAGGTGTTCTGGCTGTGCAGGGTCTCTTCATGATGCTTGTTCTTATCAGCATGCTGGTGGCATATCAATGCAGGAGAACCAAGcGGATCCGATCGTCAGGGCTTTTGCTGCTGGAGATGATCCTGTGTGGCTCTCTGTTGCTTTACTTCCCTgtctttattttatatttcaaaccCAGCACTTTCCGGTGTATTCTGCTCCGCTGGGTTCGTCTGCTTGGCTTCGCCATTGTTTATGGAACTGTGATGCTCAAGATGTACCGgGTTCTGAAGGTGTTTCTGTCACGTACGGCCCAGAGAGTGCCATACATCACTACCACAGGTGTGCTGAGGATGCTGGGAGTTATAGTGCTTACTGTCAGCTGGTTCCTTTGTGCATGGACCGTGGGCGTCCTTCAGAATCGAGACAGGAACGTTCCACTGCTGATCATTTCCACCACCTCCGAAGGACAGGGCTTCAACGTGTGCGACCTGGACCGGTGGGACTACATGATGGCTGTGGCGGAACTGTTATTTCTATGCTGGGGCAGTTTCCTGTGCAGTGCAGTGAAGACGGTACCTTCAGCATTTCACGAACCACGTTACATGAGCATCGCAATCCACAACGAGCTACTGCTCTCCTCCATGTTTCATCTTTTCAGATTTGCAAGACCATCAATTCATCCTGACTGGATGCTCTTGCTGTTCTTCACCCACACGCATGTCACGATTACTGTAACGCTCGGCCTGCTTTTTGTACCCAAGTTTCTCCACATGTCTCGGCCCGGGCGAGAGGAAATAGCTGCAGAGGTATATGAGGATGAGGTGGACTTGAGACGCTCGTGTTCTTATCTCAACAGTAGTTTCAACTCTAACTGCTGGAGTGACCACAGCTTGGACCCTGATGACATTCGGGATGAGCTGAAGAAACTGTATTCTCAGCTGGAAGTCCACAAGACCAAGAGGATGGCAAACAGCAATCCCCACCTTCCAAAGAAGCGCAGTTCTCGCCTTAGTATTGGACGGTCCCTTATAAAACGGATCAGTGAGATCCCAGAAAGTTTAAGCAGGCAATGCAGTCGTGAAGATAAGGATGTCAATGCTGCAATAGGAAGTATACCCCGATCAGGATCTTATTACAAAAGTCATCAAACCGCAAGCATTAACAAGATGAATGAAACTTTAATGCAGCCCTCGCCAAAGCTGCGGAAGTCCCATAGTGCCTATGATTGTACCCCAGAAAGAGAGGTCTCCCTATTAAACTCCTCCATAAGGAGCACAGAGAAAAGGGTTTCACTTCATTCTGACTCAGGATCCATCAACGCAACATTGCTAGTCTGCAAGTCTGCCAGTGCCCACAATCTATCGGTAGACACTAACCTTCTACTTCCAGAGCCTAGCAGGTTTCAGAAGTCACTTAGCGTCATAGAACGCAATGACCATCGCTCTGTGACTCCTTGTAGAAGCACTGAAAATGTCTCGCTTGCTGGCAAAGCTGCCCCAGCAGATAAGCCCCAGCTAACTGTGGATGTTGATATAAAGAGGCAGACTTCAAGTGCCTTGCTCTCAGAGTCATTTGACAAGGCCGAGGTCTGCCCATGGGAGGTCTCAGAGGAGCTCCCTGCAAACAAGAACCAAAAACATGTCACATATTCTATTTCCAAACAAGAAGAACCCAAATCACCTGGTGCTACCTCGTCGCCAACGATGTTATATGTTTGTCCATGGGAATTCTTGCCACCTCCTACTCCTCCTGCAACAGAAACTGGGAATGGTATTCAGTCAGATGCTGATTCCACAAAACCCAAGCTTTCAATGTCCTGTAGTGCTCCAGGGTCGCCACTCACAATCTCTGGTAAGCCGAAGGATTTTCGGGTTTTCTCGTTCCGCTCCACTACCCAAAGTCTACTTGTGGCAAAGGGCATTGGGGAAGTTGGAAGGAGTATGAGCAGAGAGAAAAGCCTACAGGAAAGTAATGTTAGGGAAGGAACACTACAGAAATCTTTGTCTACATCCATGAGATTGTCCCCAGGCAGTGCAGCTTCAGACAAGCGTACCCCTCAGACACACAGACGGGCTATGACTACCGTAGGCACAAAACCTTGCCTTGTCAAACAAACAGCGATAAGACTGCCATCTACTGATTCTCCTGAAAGGAGTCCCAAACATTCTGCTCCTTCTGCTCCAGTTCACATCTGTCCATGGGAGTCAGAGGACGTGGTCTTGGAGGTCAGGAAGCAGAATTTGAATGACAGTGTGTTACAAAGACAGTACAGTGACAAACAAGTACTATCTGCGACAGTAAGTAATGATGTCTTCAAACCCCCTGAGTTCCAACTGAAATCATTACTGGCTGTTCCCAATACAGAAGTGTGTCCGTGGGATGTCCCAAAACCTTTTCATCAAACCAGCATTTCTGAAGTGTGTCCTTGGGAGGTTGTGGAAGTAGAGCAATTGCAAACCAAGAGCATACATGCTGATGTGTGCCCTTGGGAAACAGATGGTGAGCCATCAAGAGCCCCTGaagacaatatatataataccacTGTTGAAGTCCCTATGACTGAAGACACCCAGAAGCAGGTAAATGTGAAGTCTGAGGCATGCTCTTATGTATTAGACACACATATCTCCCAGGTTAGACAAGGATCCATCAAAAACTCTAGTGACTCAATAAAACACGGTGAAAGGGTAATTTATGTCAATGCAAGACAAAGTCCAGTAGACCAAGAGATGCAGAGAGATGTGGGTTTAGAAGAACCAAGTCATATACTGAAACAAGAAGAAAGTGATTTTCCTGAACCACCCCCACCTGTAATTGATGTAAGTCCCTGTGAGTCTGAGCCAAACGCAAAAGATGCTATAAAACAGACTTTAATAGAGACCATGCCTAAGAAAGCAACTATTTGTCCGTGGGAAGCAGAGGATTCTGGGAGGTCAGAAGAGAAGGTGGGTGCTACAAACAAGGGGCCAGTTCATGTAAATGTGTGTCCATGGGAAACAAGTGAGTCTGTGAAGTCCATGCAGAAACAAGAAAGTGTCTGTGGAGATGTCTGTCCATGGGAGACAAGTGAATCAGTTGAGACCTTACAAAAGCAAGAAGGTGTTCGTGAAAATGTTTGTCCTTGGGAAACAGAAGACATGACGAAGAACTTGCAGAAACAAGAAAGTGTTCATGCAGATGTCTGTCCATGGGAGACAGGTGAGCCAGTCAAGACTTTACAGAAACAAGAAAGGATCCATCCTGATGTCTGTCCATGGGAGACAAAAGAGCCTCAAAAGGCCTTACAGGAACAAGAAAGTGTTCATCCAGATGTCTGTCCATGGGAGACAGGAGAGCCAGTCAAGATCTTGCAGAAGCAAGAAAGtgtttgtgcaaatgtttgtCCTTGGGAGACAGGAGAGCCAGCAAAAACAATGAAGAAACAAGAAAGTGTCCATGCAGATATTTGTCCTTGGGAGACAGGAGAGCCAGCAAAGACAATGCAGAAACAGGAAAGTGTCCATGCAGATGTTTGTCCTTGGGAGACAGGAGAGCCAGCAAAGACAATGCAGAAACAAGAAAGTGTCCATGCAGATGTTTGTCCTTGGGAGACAGGAGAGCCAGCAAGGAAAATGCAGAAACAAGAAAGTGTCCATGCAGATGTGTGTCCATGGGAGACAAGTGAGTCAGTCAAGACCCTGCAGAAGCAAGAAAGTGTCCGTGCAAATGTGTGTCCATGGGAGACAGGAGAGACAACAAAGGCCTTGCAGAAACAAGAAAGTGTCCATGCAGATGTCTGTCCATGGGAGACTGGTGAGCCAGTGAAGACCCTCCAGAAACAAGAAAGTGTCTACTCAGATGCCTGTGCATGGGAGGCAAAACAATCACCCAAACAATCTGTGCCACAGGACTGCACTCATGCTGTCTTATCAAAAAGGCAAGACAGTGCTCAAGAATCTGTCTGTCCAAGGGAAAATGATATGGGGACACCACCAGCAACCGAAACCAGCACAAGTCAAACTGCCCCAGATATAAGTGAGATACACCCTTCAAACACAGGCATGCAGACAGCAGAAGAGATGAGAGTTAACCCTCCTCTGGCTCGACGTGATGCACTGTGCCCTTGGGATATGGGAGCAAGCAGACAAGAATCTATTACAGTGCATGACAATTTAGATGTCTTCACTTGGGAGGAGACAATACCAGAGGAAGATGACGGTGATGCAGAAACTGCTGCAGAGGCCTTCATCTTCCCTCCAGACTTGTGATCTGCAAGGGCAGTATCATTGTGCTTTATTCAGCTTGAAAGACTTGTGGCAAAATGGGACCACTGGTCACTGGGACACTTTCCTGCTTTATGCAGAATGTCCCTCCAATGTCATCAGCACACTTCACTGACTGTTATTAAAGAAATGATTCCACCTATATGCCAATTTTCTCCCTCTGCAGCTTAACAAACTATTTCTGAAGACTGACTGCTATTATGACAGACTGCTCTCCTGTGCACATTCCCTTTTGGCCTTACATTAATACAAACACCCTGTTTAATTTGgtattgttttgtgtgtatttgtgttcattttactACGTAGATTATATTGTCGGTAAAGCCTACATCACCAACAAACCCTGGGCGGAACATTTCGaaaattttaacacattttcagtaaaaaaaagttaagatgAGCTGTCCTGATATGCACATCAACGTTGCTTAGAGCTGTTAAACAGGTACAGCTTTTAAGACCTTATGTTCTGCTCAAAAGGTTTAGATAAACATAAATTTAACAGTAATTGTAGCATTTTTCATGTCTCAAATAAGGCATTTCGACCAAACTGGTTAATTTACAATCTAAAGGGTAGCACTATTGTATTTTTCTGACAAGGAGTCAAGtattcaaaaaaaagaaagaaaataaacgtAACACTTTACATTATACTATGTGAAATAACataacacaattttaatttttttttatcttggacCAGGGAAAAGTACTTGATCTATAAAAATAGGATGATTAATTTTGATAAACTTATAATTAAACAATGTTTCATAGAACTCAGTTTTAAATCTTATATGAGGAcctgaaattaaatgttcagGGTTTACAACACAACTTTTGTCATGACATGTTTAATTCAACCTATTTACATGCTacttctgaaaaataataacagctaTAAGCAAAGGTAATGACATTAGATTGCACTTGTAATTCCTACTAGAGTtagaaaactgtttatttttgagTTTCAATGTGAACATTTCAAACTAGGAACATAAAGACTGTGCTTTTGTATGAGGTAAGATTTTTGTAAGAACCAGTCAATTTTCAACAGTAGCCAAAGGAAGTTTACATTAACTTCtatcaatgtaaaaaatgcaacatttatttttatattcttaatAATGTGTCACTTGAGTATtctgaaataaacttttaaactgcAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006252124.1 lncRNA downstream 59141 15208320 ~ 15208834 (-) True LOC122354566
TU121470 lncRNA downstream 102370 15165405 ~ 15165605 (-) True G82053
TU121449 lncRNA downstream 155237 15111001 ~ 15112738 (-) True G82037
TU121458 lncRNA downstream 161091 15105914 ~ 15106884 (-) True G82044
TU121395 lncRNA downstream 208439 15059204 ~ 15059536 (-) True G82009
TU121666 lncRNA upstream 6804 15289648 ~ 15291976 (-) True G82173
TU121669 lncRNA upstream 15072 15297916 ~ 15298875 (-) True G82176
TU121671 lncRNA upstream 17582 15300426 ~ 15301171 (-) True G82178
TU121670 lncRNA upstream 19223 15302067 ~ 15302341 (-) True G82177
TU121647 lncRNA upstream 20801 15303645 ~ 15305613 (-) True G82162
XM_043251649.1 mRNA downstream 22275 15242488 ~ 15245700 (-) True LOC122353770
XM_043252799.1 mRNA downstream 32539 15233933 ~ 15235436 (-) True LOC122354561
XM_043251648.1 mRNA downstream 53730 15209438 ~ 15214245 (-) True LOC122353768
XM_043251647.1 mRNA downstream 62241 15204939 ~ 15205734 (-) True LOC122353767
XM_043251646.1 mRNA downstream 67335 15197802 ~ 15200640 (-) True LOC122353766
XM_043252792.1 mRNA upstream 66894 15349738 ~ 15371682 (-) True jupa
XM_043252801.1 mRNA upstream 118074 15400918 ~ 15401685 (-) False LOC122354564
XM_043252260.1 mRNA upstream 140308 15423152 ~ 15430070 (-) True krt98
XM_043252098.1 mRNA upstream 185126 15467970 ~ 15474238 (-) True hyls1
XM_043252100.1 mRNA upstream 206776 15489620 ~ 15493617 (-) False ptp4a1
TU121487 other downstream 32919 15234488 ~ 15235056 (-) False LOC122354561
TU121492 other downstream 53917 15204961 ~ 15214058 (-) True G82067
TU121170 other downstream 731583 14534718 ~ 14536392 (-) True G81866
XR_006252040.1 other downstream 816235 14442601 ~ 14451740 (-) True chrna4b
TU121103 other downstream 1380710 13885683 ~ 13887265 (-) True G81829
TU121711 other upstream 118074 15400918 ~ 15401691 (-) True LOC122354564
TU122317 other upstream 2254659 17537503 ~ 17540171 (-) False G82585
TU122319 other upstream 2255539 17538383 ~ 17540171 (-) True G82585
TU122326 other upstream 2267737 17550581 ~ 17559836 (-) True G82588
TU122328 other upstream 2290758 17573602 ~ 17576984 (-) True G82590

Expression Profile