RNA id: unassigned_transcript_1499



Basic Information


Item Value
RNA id unassigned_transcript_1499
length 72
RNA type tRNA
GC content 0.57
exon number 1
gene id trnac-gca_28
representative True

Chromosome Information


Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 1113254 ~ 1113325 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gggggtatagctcagtggtagagcatttgactgcagatcaagaggtccccggttcaaatccgggtgccccct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU115937 lncRNA downstream 35795 1075785 ~ 1077459 (-) False G78339
TU115930 lncRNA downstream 38798 1072694 ~ 1074456 (-) True G78338
TU115933 lncRNA downstream 39703 1072546 ~ 1073551 (-) False G78338
TU115956 lncRNA upstream 54997 1168322 ~ 1168814 (-) True G78354
TU115978 lncRNA upstream 90551 1203876 ~ 1204107 (-) True G78373
TU115985 lncRNA upstream 98951 1212276 ~ 1213265 (-) True G78378
TU116043 lncRNA upstream 168407 1281732 ~ 1284944 (-) True G78410
TU116048 lncRNA upstream 173968 1287293 ~ 1298959 (-) False G78413
XM_043252607.1 mRNA downstream 15544 1093272 ~ 1097710 (-) True rab43
XM_043252077.1 mRNA downstream 42755 1054577 ~ 1070499 (-) False raf1b
XM_043252076.1 mRNA downstream 46198 1054577 ~ 1067056 (-) True raf1b
XM_043252079.1 mRNA downstream 67298 1044079 ~ 1045956 (-) True mkrn2os.1
XM_043251272.1 mRNA downstream 69835 1040367 ~ 1043419 (-) True mkrn2os.2
XM_043251522.1 mRNA upstream 91794 1205119 ~ 1206837 (-) True pdrg1
XM_043251322.1 mRNA upstream 94875 1208200 ~ 1211684 (-) True fam217bb
XM_043251323.1 mRNA upstream 94875 1208200 ~ 1211567 (-) False fam217bb
XM_043251560.1 mRNA upstream 103894 1217219 ~ 1260090 (-) True phactr3b
XM_043251959.1 mRNA upstream 163042 1276367 ~ 1277356 (-) True si:ch73-303b9.1
unassigned_transcript_1498 other downstream 143 1113041 ~ 1113111 (-) True trnac-gca_27
unassigned_transcript_1497 other downstream 355 1112828 ~ 1112899 (-) True trnac-gca_26
unassigned_transcript_1496 other downstream 562 1112621 ~ 1112692 (-) True trnac-gca_25
unassigned_transcript_1495 other downstream 780 1112403 ~ 1112474 (-) True trnac-gca_24
unassigned_transcript_1494 other downstream 1003 1112180 ~ 1112251 (-) True trnac-gca_23
unassigned_transcript_1500 other upstream 151 1113476 ~ 1113546 (-) True trnac-gca_29
unassigned_transcript_1501 other upstream 363 1113688 ~ 1113759 (-) True trnac-gca_30
unassigned_transcript_1502 other upstream 571 1113896 ~ 1113967 (-) True trnac-gca_31
unassigned_transcript_1503 other upstream 1846 1115171 ~ 1115243 (-) True trnac-gca_32
unassigned_transcript_1504 other upstream 2297 1115622 ~ 1115693 (-) True trnac-gca_33