RNA id: unassigned_transcript_1796



Basic Information


Item Value
RNA id unassigned_transcript_1796
length 74
RNA type tRNA
GC content 0.61
exon number 1
gene id trnai-aau_67
representative True

Chromosome Information


Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 2983470 ~ 2983543 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggccggttagctcagttggttagagagtggtgctaataacgccaaggtcgcgggttcgacccccgtacgggcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU116670 lncRNA downstream 41264 2940152 ~ 2942206 (-) False LOC122354337
XR_006252103.1 lncRNA downstream 183442 2799533 ~ 2800028 (-) True LOC122354391
TU116596 lncRNA downstream 188174 2795022 ~ 2795296 (-) True G78774
TU116595 lncRNA downstream 282741 2700513 ~ 2700729 (-) True G78773
TU116593 lncRNA downstream 285998 2697228 ~ 2697472 (-) True G78771
TU116698 lncRNA upstream 95471 3079014 ~ 3079668 (-) True G78848
TU116705 lncRNA upstream 130754 3114297 ~ 3114570 (-) True G78854
TU116765 lncRNA upstream 240192 3223735 ~ 3241319 (-) False G78899
TU116775 lncRNA upstream 247584 3231127 ~ 3232742 (-) True G78903
TU116768 lncRNA upstream 249716 3233259 ~ 3234678 (-) False G78899
XM_043252511.1 mRNA downstream 41271 2940140 ~ 2942199 (-) True LOC122354337
XM_043252510.1 mRNA downstream 153403 2819588 ~ 2830067 (-) True LOC122354336
XM_043252686.1 mRNA downstream 167342 2813352 ~ 2816128 (-) False LOC122354491
XM_043252687.1 mRNA downstream 167342 2813352 ~ 2816128 (-) True LOC122354491
XM_043252685.1 mRNA downstream 172106 2807984 ~ 2811364 (-) True LOC122354490
XM_043252373.1 mRNA upstream 12956 2996499 ~ 3037108 (-) True camk1b
XM_043252372.1 mRNA upstream 12956 2996499 ~ 3037072 (-) False camk1b
XM_043251707.1 mRNA upstream 63195 3046738 ~ 3048224 (-) True spcs1
XM_043251705.1 mRNA upstream 69153 3052696 ~ 3058430 (-) True gnl3
XM_043252009.1 mRNA upstream 270320 3253863 ~ 3256212 (-) True cdab
unassigned_transcript_1795 other downstream 87 2983312 ~ 2983383 (-) True trnaf-gaa_80
unassigned_transcript_1794 other downstream 693 2982706 ~ 2982777 (-) True trnap-ugg_9
unassigned_transcript_1793 other downstream 1450 2981947 ~ 2982020 (-) True trnai-aau_66
unassigned_transcript_1792 other downstream 1610 2981788 ~ 2981860 (-) True trnaf-gaa_79
unassigned_transcript_1791 other downstream 2217 2981182 ~ 2981253 (-) True trnap-cgg_27
unassigned_transcript_1797 other upstream 735 2984278 ~ 2984349 (-) True trnap-cgg_28
unassigned_transcript_1798 other upstream 1501 2985044 ~ 2985117 (-) True trnaf-aaa
unassigned_transcript_1799 other upstream 2915 2986458 ~ 2986531 (-) True trnai-aau_68
TU116673 other upstream 63204 3046747 ~ 3048058 (-) False spcs1
XR_006252153.1 other upstream 72154 3055697 ~ 3055773 (-) True LOC122354702