RNA id: TU14431



Basic Information


Item Value
RNA id TU14431
length 201
lncRNA type inter_gene
GC content 0.56
exon number 2
gene id G9671
representative True

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 5724701 ~ 5725016 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCCTTCTGCAAGCACAGTGTCCATCTGCATTCCTCCAATTCTGCTGAAGATAACGGCTCTCTGGCCACCCTCCACTGTATGTGGCTTCTTTGACCCCATAGGCAAGAGCTCCAGCTCCGATGAGCAGCTTCACACCCAGCCCAGCTCCTCGTGGGCCAGACCCCATCCTGCTGACAATCTGCctcagctgctgcaaaaaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU14420 lncRNA upstream 7295 5717178 ~ 5717406 (+) True G9663
TU14416 lncRNA upstream 18816 5702617 ~ 5705885 (+) True G9660
TU14417 lncRNA upstream 18816 5702617 ~ 5705885 (+) False G9660
XR_006252507.1 lncRNA upstream 117276 5604474 ~ 5607425 (+) True LOC122357632
TU14381 lncRNA upstream 133114 5577466 ~ 5591587 (+) False G9632
TU14425 lncRNA downstream 45042 5770058 ~ 5831115 (+) True G9667
TU14470 lncRNA downstream 107341 5832357 ~ 5832690 (+) True G9690
TU14472 lncRNA downstream 127253 5852269 ~ 5859952 (+) True G9692
TU14477 lncRNA downstream 417026 6142042 ~ 6142865 (+) True G9697
TU14570 lncRNA downstream 651127 6376143 ~ 6376597 (+) True G9758
XM_043254486.1 mRNA upstream 813525 4909133 ~ 4911176 (+) True LOC122355892
XM_043261999.1 mRNA upstream 825321 4898372 ~ 4899380 (+) True LOC122361055
XM_043223961.1 mRNA upstream 832940 4888123 ~ 4891761 (+) True foxf2a
XM_043223968.1 mRNA upstream 832940 4888127 ~ 4891761 (+) False foxf2a
XM_043223980.1 mRNA upstream 838736 4884610 ~ 4885965 (+) True LOC122328338
XM_043223281.1 mRNA downstream 5589 5730605 ~ 5763859 (+) False pex5lb
XM_043223272.1 mRNA downstream 5589 5730605 ~ 5763859 (+) False pex5lb
XM_043223261.1 mRNA downstream 5590 5730606 ~ 5763859 (+) True pex5lb
XM_043223290.1 mRNA downstream 5591 5730607 ~ 5763859 (+) False pex5lb
XM_043223372.1 mRNA downstream 40052 5765068 ~ 5779593 (+) False gnb4a
TU14373 other upstream 115425 5608327 ~ 5609276 (+) True G9630
TU14284 other upstream 814903 4909129 ~ 4909798 (+) False LOC122355892
TU14282 other upstream 814903 4909136 ~ 4909798 (+) False LOC122355892
TU14280 other upstream 825415 4898398 ~ 4899286 (+) False LOC122361055
XR_006247003.1 other upstream 1136223 4579274 ~ 4588478 (+) True mylk4a
TU14467 other downstream 98977 5823993 ~ 5826286 (+) False dusp28
unassigned_transcript_185 other downstream 244634 5969650 ~ 5969724 (+) True trnag-gcc_1
unassigned_transcript_186 other downstream 246503 5971519 ~ 5971593 (+) True trnag-gcc_2
unassigned_transcript_187 other downstream 249699 5974715 ~ 5974786 (+) True trnag-gcc_3
unassigned_transcript_188 other downstream 252899 5977915 ~ 5977989 (+) True trnag-gcc_4

Expression Profile