RNA id: TU14775



Basic Information


Item Value
RNA id TU14775
length 209
lncRNA type inter_gene
GC content 0.57
exon number 1
gene id G9918
representative True

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 6925969 ~ 6926177 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GAAGCTCAGATcacaagtcactttatttatagaggaaaggacagagcaagataagtaaaagcaacaggcaaaacaaagacttcagacatgttcgtcacataagttatgactagtcacatatctttttgtgcgtcagaatcttcattccctcagattcccctggcgcccataccagtctaagatactatatagaggccatgtcatgtcat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU14749 lncRNA upstream 83544 6842151 ~ 6842425 (+) True G9901
TU14740 lncRNA upstream 96873 6828447 ~ 6829096 (+) True G9893
TU14739 lncRNA upstream 169877 6755823 ~ 6756092 (+) True G9892
TU14737 lncRNA upstream 183796 6741733 ~ 6742173 (+) True G9890
TU14731 lncRNA upstream 276169 6649446 ~ 6649800 (+) True G9884
TU14790 lncRNA downstream 74883 7001060 ~ 7001479 (+) True G9928
TU14792 lncRNA downstream 83183 7009360 ~ 7010594 (+) True G9930
XR_006247246.1 lncRNA downstream 109879 7036056 ~ 7036460 (+) True LOC122324999
TU14802 lncRNA downstream 109944 7036121 ~ 7036498 (+) False LOC122324999
XR_006247410.1 lncRNA downstream 116654 7042831 ~ 7043088 (+) True LOC122325829
XM_043260277.1 mRNA upstream 46320 6856244 ~ 6879649 (+) True bpnt2
XM_043260288.1 mRNA upstream 46320 6856254 ~ 6879649 (+) False bpnt2
XM_043260296.1 mRNA upstream 46320 6856685 ~ 6879649 (+) False bpnt2
XM_043260303.1 mRNA upstream 47446 6856251 ~ 6878523 (+) False bpnt2
XM_043260312.1 mRNA upstream 47446 6856263 ~ 6878523 (+) False bpnt2
XM_043256234.1 mRNA downstream 44316 6970493 ~ 6973171 (+) False penka
XM_043256227.1 mRNA downstream 44317 6970494 ~ 6973171 (+) True penka
XM_043258773.1 mRNA downstream 157957 7084134 ~ 7098176 (+) True cryz
XM_043258792.1 mRNA downstream 157957 7084134 ~ 7098176 (+) False cryz
XM_043258783.1 mRNA downstream 158052 7084229 ~ 7098176 (+) False cryz
TU14736 other upstream 233594 6691668 ~ 6692375 (+) True G9889
TU14734 other upstream 235190 6690372 ~ 6690779 (+) True G9887
TU14569 other upstream 558015 6367177 ~ 6367954 (+) True sst2
unassigned_transcript_205 other upstream 703450 6222445 ~ 6222519 (+) True trnag-gcc_21
unassigned_transcript_204 other upstream 705469 6220426 ~ 6220500 (+) True trnag-gcc_20
TU14783 other downstream 60121 6986298 ~ 6987119 (+) True G9925
TU15034 other downstream 579414 7505591 ~ 7582385 (+) False G10108
TU15202 other downstream 1180688 8106865 ~ 8107777 (+) True G10212
XR_006252402.1 other downstream 2236434 9162611 ~ 9171915 (+) False olfm3b
TU15832 other downstream 2820417 9746594 ~ 9751212 (+) True arpc5a

Expression Profile