RNA id: TU14911


Basic Information

Item Value
RNA id TU14911
length 201
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G10021
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 7210738 ~ 7210938 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTTTGAACTTCTCTACAGAGGTTCCTCGAGTGGGTTTGTCAAAGAGTGCGACCTCTTTCTTTGGCTCCAGCTCCTCTCCTAGCTCATAGTGCAGAATGTCACTCAGTTGACACTTGATGACACCATCATGATCACCCCAGCTGCCTGTATAGACCTGAGAGCAACAGAGGAACATACTGTTATCATGACAATACTTGGGAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU14910 lncRNA upstream 804 7206507 ~ 7209934 (+) True G10020
TU14903 lncRNA upstream 11201 7197090 ~ 7199537 (+) True G10013
TU14902 lncRNA upstream 14338 7189655 ~ 7196400 (+) True G10012
TU14819 lncRNA upstream 110077 7099628 ~ 7100661 (+) False lrrc53
TU14808 lncRNA upstream 159744 7050725 ~ 7050994 (+) True G9940
TU14967 lncRNA downstream 74740 7285678 ~ 7300079 (+) False gng12a
TU15018 lncRNA downstream 209504 7420442 ~ 7421878 (+) True G10094
TU15044 lncRNA downstream 270692 7481630 ~ 7555541 (+) True G10112
TU15033 lncRNA downstream 293684 7504622 ~ 7582245 (+) True G10108
TU15035 lncRNA downstream 293684 7504622 ~ 7582245 (+) False G10108
XM_043221812.1 mRNA upstream 4336 7203301 ~ 7206402 (+) True rpl5a
XM_043221692.1 mRNA upstream 25724 7176935 ~ 7185014 (+) True rpap2
XM_043221756.1 mRNA upstream 40623 7164705 ~ 7170115 (+) False cdc7
XM_043224143.1 mRNA downstream 14152 7225090 ~ 7236113 (+) True mtf2
XM_043223526.1 mRNA downstream 26001 7236939 ~ 7254571 (+) True ccdc18
XM_043223534.1 mRNA downstream 26001 7236939 ~ 7254571 (+) False ccdc18
XM_043223539.1 mRNA downstream 26415 7237353 ~ 7254571 (+) False ccdc18
XM_043257663.1 mRNA downstream 46226 7257164 ~ 7268405 (+) True scinlb
TU14783 other upstream 223619 6986298 ~ 6987119 (+) True G9925
TU14736 other upstream 518363 6691668 ~ 6692375 (+) True G9889
TU14734 other upstream 519959 6690372 ~ 6690779 (+) True G9887
TU14569 other upstream 842784 6367177 ~ 6367954 (+) True sst2
unassigned_transcript_205 other upstream 988219 6222445 ~ 6222519 (+) True trnag-gcc_21
TU15034 other downstream 294653 7505591 ~ 7582385 (+) False G10108
TU15202 other downstream 895927 8106865 ~ 8107777 (+) True G10212
XR_006252402.1 other downstream 1951673 9162611 ~ 9171915 (+) False olfm3b
TU15832 other downstream 2535656 9746594 ~ 9751212 (+) True arpc5a
XR_006247735.1 other downstream 2700690 9911628 ~ 9916861 (+) True znf414

Expression Profile