RNA id: XM_043216746.1


Basic Information

Item Value
RNA id XM_043216746.1
length 1552
RNA type mRNA
GC content 0.38
exon number 3
gene id gng12a
representative False

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 7285670 ~ 7300101 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTCttgtgcattcatttttgtactttttttaattgggaAAATGCATTTGACTCTGTTTGTGCTGTAAGGGTGTCGGGTTTGTGAATGCAGCGTCATGATCTACTGCCACTGCGTTCTGTTCTCTGATGCTGACGCACAGttatATGGTTTCAAAAATGTCCTCTAAAATGGCGGGCTCAAACAACCTGGCACACGCTAGGAGGATGGTACAGCAACTGAGAGTCGAGGCCAGTATCGAAAGGATAAAGGTATCCAAGGCCTCAGCTGACCTCATGCGTTACTGTGGAGAAAACGCCAAATACGACCCCCTGCTCATGGGCATCCCTGCCTCAGAAAACCCCTTCAAGGACAAAAAGCCCTGCACTATATTGTAGTGCAATAAGCATTCATCTTATTTAATTACTTCTACTCAACTTTCCCTTAAGTCCAGCTCTAGCTCCTTAGTATAACTTTGTGTCGTGTCTTAACTGTATTTAGCtcttacagtatttattactgtaaataaactCCAATCAGTACTAATTAATTGCCTTTTTGGTAATTATTAGAATTGAATCTCATCTTCACCGGCGTGACTCGTCTTCTGTTTGGTTGTTTGGGCCAAACTGAAATTATTCCACGAAATGATCCTATAAATCGAGccatttagatgttttaaaatggcCTTAAGTTCCACTCTCCACCAAACAATgcctttttatttacacttttagtTTGAAATAGGGAAGTAGCACATCACATTATGATACGAGGAGCTTGCAACTACATTAACTGATTAAATCTCACTTAACGTGTGTTATGTGTTCCTCTAGCAACGCACATGAATAATGTCATAGCAAAGGGACTGACTGAAATAAATGGAATTTAAAGATCcatatttttatgaatctgATGTGACTTCTGCAAATCATCACTTTTTaagtgcatgctgggtaaaTACAACAATACAGTGAATCTCACACAAATACCGATTTGTTCTCTATGAAAGGCGGTACCACTATGTGCAAAACCATAAGAGACGAGTTTCTGTTGTGGTTTTCGTGAACTACCCTGCACTTTCAAACCATTGTGCCTTAGATTGAGCAAAGCGGTTCTTGCTTATTACAGATACACACGAATGAAAAGAggacatgttttattttttttgatgacaCTGAGCACATTTTCTGTTCCGTTTTAAGTGCCTTTTCATTCTGATTTAATGACTTTTGTAACACAACCACTGTTGTTTGATCTTGTCtatgaattgaattgaatggaTTTTTCCCAAAAAGGGCAGTTGTGAAACATTCACCTTTAATGGGCCAAGCATCCATATGTTGATGCTGCAGCGTCTGTGTTATTGTGGAGGCATCAGAGAAGTTACGCAGCGTTTGAGATTCACGACCAAATTCCTGTGACCTCAGTATCTCTGTGAAGAAACGAGTTTCCTTTTGTTCGTTTTGGTGTTTCTTTCTATTccaatttctgtatttttgcaaGCCTTCATAACATGTGCTATACGTACTGTACCTTGAAagaaagattttattaaaattttgaaATAGTAAAA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005834 heterotrimeric G-protein complex cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU14911 lncRNA upstream 87048 7210738 ~ 7210938 (+) True G10021
TU14910 lncRNA upstream 88052 7206507 ~ 7209934 (+) True G10020
TU14903 lncRNA upstream 98449 7197090 ~ 7199537 (+) True G10013
TU14902 lncRNA upstream 101586 7189655 ~ 7196400 (+) True G10012
TU14819 lncRNA upstream 197325 7099628 ~ 7100661 (+) False lrrc53
TU15018 lncRNA downstream 120341 7420442 ~ 7421878 (+) True G10094
TU15044 lncRNA downstream 181529 7481630 ~ 7555541 (+) True G10112
TU15033 lncRNA downstream 204521 7504622 ~ 7582245 (+) True G10108
TU15035 lncRNA downstream 204521 7504622 ~ 7582245 (+) False G10108
TU15039 lncRNA downstream 204521 7504622 ~ 7582245 (+) False G10108
XM_043257685.1 mRNA upstream 14176 7269715 ~ 7283810 (+) True wls
XM_043257663.1 mRNA upstream 29581 7257164 ~ 7268405 (+) True scinlb
XM_043257672.1 mRNA upstream 29581 7257492 ~ 7268405 (+) False scinlb
XM_043223534.1 mRNA upstream 43415 7236939 ~ 7254571 (+) False ccdc18
XM_043256194.1 mRNA downstream 40170 7340271 ~ 7346655 (+) False dmbx1a
XM_043256186.1 mRNA downstream 40170 7340271 ~ 7346655 (+) True dmbx1a
XM_043256906.1 mRNA downstream 88317 7388418 ~ 7391035 (+) True ptger4c
XM_043218822.1 mRNA downstream 1015030 8315131 ~ 8318467 (+) True glula
XM_043263850.1 mRNA downstream 1073137 8373238 ~ 8382443 (+) False elovl1a
TU14783 other upstream 310867 6986298 ~ 6987119 (+) True G9925
TU14736 other upstream 605611 6691668 ~ 6692375 (+) True G9889
TU14734 other upstream 607207 6690372 ~ 6690779 (+) True G9887
TU14569 other upstream 930032 6367177 ~ 6367954 (+) True sst2
unassigned_transcript_205 other upstream 1075467 6222445 ~ 6222519 (+) True trnag-gcc_21
TU15034 other downstream 205490 7505591 ~ 7582385 (+) False G10108
TU15202 other downstream 806764 8106865 ~ 8107777 (+) True G10212
XR_006252402.1 other downstream 1862510 9162611 ~ 9171915 (+) False olfm3b
TU15832 other downstream 2446493 9746594 ~ 9751212 (+) True arpc5a
XR_006247735.1 other downstream 2611527 9911628 ~ 9916861 (+) True znf414

Expression Profile