RNA id: TU15089


Basic Information

Item Value
RNA id TU15089
length 377
lncRNA type inter_gene
GC content 0.52
exon number 2
gene id G10145
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 7611268 ~ 7612187 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGCGTGTCCTAGAGTACTAACCTGACAGGAGCAGTGGTGGGCACTTTGGGCAGGTTGATGGTGAGTTTACCATTGCTGGTCTGGTCTGCTGTGAACAGGGCAGGTTTAGTTTTGAACAGGTCCGGTGCGGTTCGGATCGAGACCTGCTGCTGCAGGCCACCAGCGCTGTTCCCCCGGCTCATCAGCACGAAGGAGTAATTAGTGTCCGGCTGCAGTCGTGTGATCAGCTTCCTTTTGAGGTTGCCCTGGACTTCCACACTCTGCTGGTTATAGAGGATCTAAAAGGCACTAGGGATTTATAATTTTCTGGTACTTCCCAGGTGAGAAGGACTGAGGTTTTCATCACAGCTTTGACACCAAAACTTGTGGCAAATGCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU15033 lncRNA upstream 29023 7504622 ~ 7582245 (+) True G10108
TU15035 lncRNA upstream 29023 7504622 ~ 7582245 (+) False G10108
TU15039 lncRNA upstream 29023 7504622 ~ 7582245 (+) False G10108
TU15037 lncRNA upstream 29023 7505591 ~ 7582245 (+) False G10108
TU15044 lncRNA upstream 55727 7481630 ~ 7555541 (+) True G10112
TU15064 lncRNA downstream 1162 7613349 ~ 7615136 (+) True G10127
TU15156 lncRNA downstream 173291 7785478 ~ 7785832 (+) True G10179
TU15160 lncRNA downstream 262296 7874483 ~ 7882477 (+) True G10183
TU15166 lncRNA downstream 343606 7955793 ~ 7956206 (+) True G10188
XR_006247501.1 lncRNA downstream 415563 8027750 ~ 8031107 (+) True LOC122326720
XM_043256906.1 mRNA upstream 220233 7388418 ~ 7391035 (+) True ptger4c
XM_043256194.1 mRNA upstream 264613 7340271 ~ 7346655 (+) False dmbx1a
XM_043256186.1 mRNA upstream 264613 7340271 ~ 7346655 (+) True dmbx1a
XM_043216752.1 mRNA upstream 311167 7285670 ~ 7300101 (+) True gng12a
XM_043218822.1 mRNA downstream 702944 8315131 ~ 8318467 (+) True glula
XM_043263850.1 mRNA downstream 761051 8373238 ~ 8382443 (+) False elovl1a
XM_043263841.1 mRNA downstream 765105 8377292 ~ 8382443 (+) True elovl1a
XM_043263798.1 mRNA downstream 774690 8386877 ~ 8403214 (+) True cc2d1b
XM_043263812.1 mRNA downstream 774690 8386877 ~ 8403214 (+) False cc2d1b
TU15034 other upstream 28883 7505591 ~ 7582385 (+) False G10108
TU14783 other upstream 624149 6986298 ~ 6987119 (+) True G9925
TU14736 other upstream 918893 6691668 ~ 6692375 (+) True G9889
TU14734 other upstream 920489 6690372 ~ 6690779 (+) True G9887
TU14569 other upstream 1243314 6367177 ~ 6367954 (+) True sst2
TU15202 other downstream 494678 8106865 ~ 8107777 (+) True G10212
XR_006252402.1 other downstream 1550424 9162611 ~ 9171915 (+) False olfm3b
TU15832 other downstream 2134407 9746594 ~ 9751212 (+) True arpc5a
XR_006247735.1 other downstream 2299441 9911628 ~ 9916861 (+) True znf414
XR_006247736.1 other downstream 2299441 9911628 ~ 9915491 (+) False znf414

Expression Profile