Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU15156 |
| length | 355 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G10179 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056700.1 |
| NCBI id | CM032069.1 |
| chromosome length | 25613461 |
| location | 7785478 ~ 7785832 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0009063 | cellular amino acid catabolic process | biological_process |
| GO:0009078 | pyruvate family amino acid metabolic process | biological_process |
| GO:0009080 | pyruvate family amino acid catabolic process | biological_process |
| GO:1901605 | alpha-amino acid metabolic process | biological_process |
| GO:1901606 | alpha-amino acid catabolic process | biological_process |
| GO:0046395 | carboxylic acid catabolic process | biological_process |
| GO:0042851 | L-alanine metabolic process | biological_process |
| GO:0042853 | L-alanine catabolic process | biological_process |
| GO:0044282 | small molecule catabolic process | biological_process |
| GO:0006522 | alanine metabolic process | biological_process |
| GO:0006524 | alanine catabolic process | biological_process |
| GO:0016054 | organic acid catabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU15065 | lncRNA | upstream | 115020 | 7567310 ~ 7670458 (+) | False | G10127 |
| TU15064 | lncRNA | upstream | 170342 | 7613349 ~ 7615136 (+) | True | G10127 |
| TU15089 | lncRNA | upstream | 173291 | 7611268 ~ 7612187 (+) | True | G10145 |
| TU15033 | lncRNA | upstream | 203233 | 7504622 ~ 7582245 (+) | True | G10108 |
| TU15160 | lncRNA | downstream | 88651 | 7874483 ~ 7882477 (+) | True | G10183 |
| TU15166 | lncRNA | downstream | 169961 | 7955793 ~ 7956206 (+) | True | G10188 |
| XR_006247501.1 | lncRNA | downstream | 241918 | 8027750 ~ 8031107 (+) | True | LOC122326720 |
| TU15180 | lncRNA | downstream | 295985 | 8081817 ~ 8090536 (+) | False | G10198 |
| TU15177 | lncRNA | downstream | 296114 | 8081946 ~ 8090536 (+) | True | G10198 |
| XM_043256906.1 | mRNA | upstream | 394443 | 7388418 ~ 7391035 (+) | True | ptger4c |
| XM_043256194.1 | mRNA | upstream | 438823 | 7340271 ~ 7346655 (+) | False | dmbx1a |
| XM_043256186.1 | mRNA | upstream | 438823 | 7340271 ~ 7346655 (+) | True | dmbx1a |
| XM_043216752.1 | mRNA | upstream | 485377 | 7285670 ~ 7300101 (+) | True | gng12a |
| XM_043218822.1 | mRNA | downstream | 529299 | 8315131 ~ 8318467 (+) | True | glula |
| XM_043263850.1 | mRNA | downstream | 587406 | 8373238 ~ 8382443 (+) | False | elovl1a |
| XM_043263841.1 | mRNA | downstream | 591460 | 8377292 ~ 8382443 (+) | True | elovl1a |
| XM_043263798.1 | mRNA | downstream | 601045 | 8386877 ~ 8403214 (+) | True | cc2d1b |
| XM_043263812.1 | mRNA | downstream | 601045 | 8386877 ~ 8403214 (+) | False | cc2d1b |
| TU15034 | other | upstream | 203093 | 7505591 ~ 7582385 (+) | False | G10108 |
| TU14783 | other | upstream | 798359 | 6986298 ~ 6987119 (+) | True | G9925 |
| TU14736 | other | upstream | 1093103 | 6691668 ~ 6692375 (+) | True | G9889 |
| TU14734 | other | upstream | 1094699 | 6690372 ~ 6690779 (+) | True | G9887 |
| TU14569 | other | upstream | 1417524 | 6367177 ~ 6367954 (+) | True | sst2 |
| TU15202 | other | downstream | 321033 | 8106865 ~ 8107777 (+) | True | G10212 |
| XR_006252402.1 | other | downstream | 1376779 | 9162611 ~ 9171915 (+) | False | olfm3b |
| TU15832 | other | downstream | 1960762 | 9746594 ~ 9751212 (+) | True | arpc5a |
| XR_006247735.1 | other | downstream | 2125796 | 9911628 ~ 9916861 (+) | True | znf414 |
| XR_006247736.1 | other | downstream | 2125796 | 9911628 ~ 9915491 (+) | False | znf414 |
