RNA id: TU15166



Basic Information


Item Value
RNA id TU15166
length 414
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G10188
representative True

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 7955793 ~ 7956206 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


aaaaaagaaaaagaaaaaagaaaggctgGGAAACACTGTCCTGGAAGATCTGAAGTGGTGGGATGAATTTCAGTATTGCTCAAAGAAAGAGTGTATCAAAGGGCCGCGGTCTGCTTATTTTGCTTTCAGGAAAGTAGGTTGGCATAGTGCTTCAGTCATGGAGCATCCTTAAGAGGCTTGGTGCGATCCAATTAAAAAGAGCTTCCTGGTGGCTGTCATTGCAGCCAGCTTTGCTTCTCAGTTAAACAGGAAAGTCCTATTCTCCAGCCACCCACTAAGACACCTCAAAGACCGCCAAATCTGTTTTCATCACCCAGCATCACGATCTGTCATGTTAATATAAAGCGTGTGAAGGTTATCAGCTTAATTAAATATCCACaaaagaactgatgaaattaaaatacagatgtaaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU15160 lncRNA upstream 73316 7874483 ~ 7882477 (+) True G10183
TU15156 lncRNA upstream 169961 7785478 ~ 7785832 (+) True G10179
TU15065 lncRNA upstream 285335 7567310 ~ 7670458 (+) False G10127
TU15064 lncRNA upstream 340657 7613349 ~ 7615136 (+) True G10127
TU15089 lncRNA upstream 343606 7611268 ~ 7612187 (+) True G10145
XR_006247501.1 lncRNA downstream 71544 8027750 ~ 8031107 (+) True LOC122326720
TU15180 lncRNA downstream 125611 8081817 ~ 8090536 (+) False G10198
TU15177 lncRNA downstream 125740 8081946 ~ 8090536 (+) True G10198
TU15183 lncRNA downstream 127330 8083536 ~ 8084031 (+) True G10200
TU15184 lncRNA downstream 127330 8083536 ~ 8089471 (+) False G10200
XM_043256906.1 mRNA upstream 564758 7388418 ~ 7391035 (+) True ptger4c
XM_043256194.1 mRNA upstream 609138 7340271 ~ 7346655 (+) False dmbx1a
XM_043256186.1 mRNA upstream 609138 7340271 ~ 7346655 (+) True dmbx1a
XM_043216752.1 mRNA upstream 655692 7285670 ~ 7300101 (+) True gng12a
XM_043218822.1 mRNA downstream 358925 8315131 ~ 8318467 (+) True glula
XM_043263850.1 mRNA downstream 417032 8373238 ~ 8382443 (+) False elovl1a
XM_043263841.1 mRNA downstream 421086 8377292 ~ 8382443 (+) True elovl1a
XM_043263798.1 mRNA downstream 430671 8386877 ~ 8403214 (+) True cc2d1b
XM_043263812.1 mRNA downstream 430671 8386877 ~ 8403214 (+) False cc2d1b
TU15034 other upstream 373408 7505591 ~ 7582385 (+) False G10108
TU14783 other upstream 968674 6986298 ~ 6987119 (+) True G9925
TU14736 other upstream 1263418 6691668 ~ 6692375 (+) True G9889
TU14734 other upstream 1265014 6690372 ~ 6690779 (+) True G9887
TU14569 other upstream 1587839 6367177 ~ 6367954 (+) True sst2
TU15202 other downstream 150659 8106865 ~ 8107777 (+) True G10212
XR_006252402.1 other downstream 1206405 9162611 ~ 9171915 (+) False olfm3b
TU15832 other downstream 1790388 9746594 ~ 9751212 (+) True arpc5a
XR_006247735.1 other downstream 1955422 9911628 ~ 9916861 (+) True znf414
XR_006247736.1 other downstream 1955422 9911628 ~ 9915491 (+) False znf414

Expression Profile