RNA id: TU15183


Basic Information

Item Value
RNA id TU15183
length 311
lncRNA type inter_gene
GC content 0.53
exon number 2
gene id G10200
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 8083536 ~ 8089471 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGAATAAACAGTCTCTGCTACCTCTCTGTCAGCATTAGCTGTACCGGGATCTCCCCCTTCTAAACCAGgatcttctctttcttctggaCTCTGATCTGGTTGTTCTCCACGGACCTCTTCAGTGAACATCAACTCAGCAGCTTCTGTATGAGGTCCATCCAATTCACCTCCAAGgTCCTGTCCTGGTCTCTGGCGGCGCAGAAACTTTTCTTGGGTCTTCAGGAATGGACAACCTCACTTCATCCCCAACAGGTAAGATATGGTCTCGGTGTAACATTCTCATACTCCCCATACCGGATTCAGGTTTCAGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006247501.1 lncRNA upstream 52429 8027750 ~ 8031107 (+) True LOC122326720
TU15166 lncRNA upstream 127330 7955793 ~ 7956206 (+) True G10188
TU15160 lncRNA upstream 201059 7874483 ~ 7882477 (+) True G10183
TU15156 lncRNA upstream 297704 7785478 ~ 7785832 (+) True G10179
TU15064 lncRNA upstream 468400 7613349 ~ 7615136 (+) True G10127
TU15209 lncRNA downstream 135234 8219265 ~ 8262830 (+) True G10219
TU15220 lncRNA downstream 438371 8522402 ~ 8528707 (+) False G10226
TU15223 lncRNA downstream 438371 8522402 ~ 8528707 (+) False G10226
TU15224 lncRNA downstream 438371 8522402 ~ 8528707 (+) False G10226
TU15228 lncRNA downstream 438371 8522402 ~ 8528707 (+) True G10226
XM_043256906.1 mRNA upstream 692501 7388418 ~ 7391035 (+) True ptger4c
XM_043256194.1 mRNA upstream 736881 7340271 ~ 7346655 (+) False dmbx1a
XM_043256186.1 mRNA upstream 736881 7340271 ~ 7346655 (+) True dmbx1a
XM_043216752.1 mRNA upstream 783435 7285670 ~ 7300101 (+) True gng12a
XM_043218822.1 mRNA downstream 231100 8315131 ~ 8318467 (+) True glula
XM_043263850.1 mRNA downstream 289207 8373238 ~ 8382443 (+) False elovl1a
XM_043263841.1 mRNA downstream 293261 8377292 ~ 8382443 (+) True elovl1a
XM_043263798.1 mRNA downstream 302846 8386877 ~ 8403214 (+) True cc2d1b
XM_043263812.1 mRNA downstream 302846 8386877 ~ 8403214 (+) False cc2d1b
TU15034 other upstream 501151 7505591 ~ 7582385 (+) False G10108
TU14783 other upstream 1096417 6986298 ~ 6987119 (+) True G9925
TU14736 other upstream 1391161 6691668 ~ 6692375 (+) True G9889
TU14734 other upstream 1392757 6690372 ~ 6690779 (+) True G9887
TU14569 other upstream 1715582 6367177 ~ 6367954 (+) True sst2
TU15202 other downstream 22834 8106865 ~ 8107777 (+) True G10212
XR_006252402.1 other downstream 1078580 9162611 ~ 9171915 (+) False olfm3b
TU15832 other downstream 1662563 9746594 ~ 9751212 (+) True arpc5a
XR_006247735.1 other downstream 1827597 9911628 ~ 9916861 (+) True znf414
XR_006247736.1 other downstream 1827597 9911628 ~ 9915491 (+) False znf414

Expression Profile