RNA id: TU15324


Basic Information

Item Value
RNA id TU15324
length 916
lncRNA type inter_gene
GC content 0.63
exon number 2
gene id G10284
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 8587377 ~ 8589074 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCTAAAACACCGATGCTTGTTTCACTCTTACTGAATAACTTTTTCTGGCGAATTATGCAATCAACAAGTGCACGTGTGCGGACAGCTAAAATGTTTTGGACAATACAAATGTTCTTTGCTCTGTGTGTACAACGAACGCGTTACGATTAGTGAcctaaattttagtttttgtattaaatacaaaGCAATTCGCACTAAAAATGACACGCAGACGGGGTTCATGCAGTTAATGAGCTCAACAAGATGTGAATGATTATAACGCAGCACCGTACAATATAGAAATTATTATTCGTGTTTTGAAAAATCCAAACGGCTCAATAATCTCACTTTGAATGGGCACGACGCCTTTGgttatcttttatatatataatcagcaccgttaattttttttactgttcctTATCTACCGCTAAACTTCATAAATTGTTGCATTAAGATATTATTTACTTGCTGTTTCACGATGATTCTCCGCCATCATCCTCAGGACTTCATCCTTAATGGATCTGACAACAGGTTGCTCGTcgagctgtccctttaaatgttcATCACGGACAAGGACCCTCTCCACCACCGTCCCGTCCACCAAAACACTGCGCTCGAATTGAACGCAGACGTCCCTCGGAAGAGCCCGGCATAAATGTACGAGAAAAGCGAAGGTTACGAAGAGGAGCATTTCTGCGCGATGTGGAGCGAAGGCGGCGATGGGTACGGTTTGTTTTGAATCGATGTATTTCTTTCGGTTTCTATTTGTCGCATTATCATTCACGCCTCGCGGCTTTTATAAACGAAACAAGACGACTGGAGCGGGCAAAATATCCCGAGCTGGCGCAAAACCGTCGCGCGCAGCGAGCAGGTTAAACATGTAGTAGACGGTAAGAGCTCTTGCGTGTCATTGGCTGTTACCAGGAGAAACTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU15298 lncRNA upstream 26535 8560098 ~ 8561513 (+) True G10271
TU15220 lncRNA upstream 59341 8522402 ~ 8528707 (+) False G10226
XR_006252375.1 lncRNA downstream 173765 8762839 ~ 8765451 (+) True LOC122356731
TU15453 lncRNA downstream 209517 8798591 ~ 8798996 (+) True G10371
TU15463 lncRNA downstream 290868 8879942 ~ 8880453 (+) True G10374
TU15539 lncRNA downstream 340430 8929504 ~ 8930073 (+) True G10431
TU15541 lncRNA downstream 350895 8939969 ~ 8941186 (+) True G10433
XM_043216810.1 mRNA upstream 101144 8443177 ~ 8486904 (+) False clcn2a
XM_043258048.1 mRNA downstream 1167 8590241 ~ 8599595 (+) True atp1b3a
XM_043222148.1 mRNA downstream 41338 8630412 ~ 8651546 (+) True atr
XM_043253247.1 mRNA downstream 62843 8651917 ~ 8662323 (+) True amer3
XM_043262402.1 mRNA downstream 241746 8830820 ~ 8841734 (+) True LOC122361595
XM_043259139.1 mRNA downstream 259253 8848327 ~ 8877202 (+) False LOC122359011
TU15202 other upstream 480271 8106865 ~ 8107777 (+) True G10212
TU15034 other upstream 1005663 7505591 ~ 7582385 (+) False G10108
TU14783 other upstream 1600929 6986298 ~ 6987119 (+) True G9925
TU14736 other upstream 1895673 6691668 ~ 6692375 (+) True G9889
TU14734 other upstream 1897269 6690372 ~ 6690779 (+) True G9887
XR_006252402.1 other downstream 573537 9162611 ~ 9171915 (+) False olfm3b
TU15832 other downstream 1157520 9746594 ~ 9751212 (+) True arpc5a
XR_006247735.1 other downstream 1322554 9911628 ~ 9916861 (+) True znf414
XR_006247736.1 other downstream 1322554 9911628 ~ 9915491 (+) False znf414
TU16308 other downstream 2122056 10711130 ~ 10718194 (+) True G10979

Expression Profile