RNA id: TU15463



Basic Information


Item Value
RNA id TU15463
length 335
lncRNA type inter_gene
GC content 0.61
exon number 2
gene id G10374
representative True

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 8879942 ~ 8880453 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CGTCGGCGAGTAGAGAGAGCTCGCTGCTGCTGGCGGCGTCGTAGTCGTAGAGCACACGGGCCTTGCGGGTGCCTGAGGTGCTGCGGAGCTCGTTGAGCGCGGGTGACGTCTGGCTGGGCGGCGGGGCGGGCAGTGAGGCGGCCGGCTGTGCCGTGGGAACAGAGATGCTGGCGGAGGAGCCGCCGGACGGCTGATTGTTGTTAGAGAACGTAGATGGAAAACCTTCCCAGCTGTTTCTGAAGATTGACCATGTACTGGTAGCACTGGGCGTAATATGAGGCTTGGGCGTCCACAAAGTCATTCAGACAGCGCAAGTGATGAGCCTGATCACACAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU15453 lncRNA upstream 80946 8798591 ~ 8798996 (+) True G10371
XR_006252375.1 lncRNA upstream 114491 8762839 ~ 8765451 (+) True LOC122356731
TU15319 lncRNA upstream 290868 8587377 ~ 8589074 (+) False G10284
TU15324 lncRNA upstream 290868 8588048 ~ 8589074 (+) True G10284
TU15317 lncRNA upstream 290868 8588495 ~ 8589074 (+) False G10284
TU15539 lncRNA downstream 49051 8929504 ~ 8930073 (+) True G10431
TU15541 lncRNA downstream 59516 8939969 ~ 8941186 (+) True G10433
TU15556 lncRNA downstream 175270 9055723 ~ 9056245 (+) True G10445
TU15557 lncRNA downstream 176637 9057090 ~ 9057859 (+) True G10446
TU15580 lncRNA downstream 335052 9215505 ~ 9216664 (+) True G10466
XM_043259092.1 mRNA upstream 1842 8851116 ~ 8878100 (+) False LOC122359011
XM_043259139.1 mRNA upstream 2740 8848327 ~ 8877202 (+) False LOC122359011
XM_043259083.1 mRNA upstream 2740 8851112 ~ 8877202 (+) False LOC122359011
XM_043259112.1 mRNA upstream 2740 8851405 ~ 8877202 (+) False LOC122359011
XM_043259103.1 mRNA upstream 2740 8866149 ~ 8877202 (+) True LOC122359011
XM_043217443.1 mRNA downstream 10320 8890773 ~ 8929310 (+) True vav3b
XM_043224154.1 mRNA downstream 207241 9087694 ~ 9154434 (+) True col11a1b
XM_043256072.1 mRNA downstream 282158 9162611 ~ 9170967 (+) False olfm3b
XM_043256064.1 mRNA downstream 282158 9162611 ~ 9169785 (+) True olfm3b
XM_043254902.1 mRNA downstream 293400 9173853 ~ 9180307 (+) False tecrl2b
TU15202 other upstream 772165 8106865 ~ 8107777 (+) True G10212
TU15034 other upstream 1297557 7505591 ~ 7582385 (+) False G10108
TU14783 other upstream 1892823 6986298 ~ 6987119 (+) True G9925
TU14736 other upstream 2187567 6691668 ~ 6692375 (+) True G9889
TU14734 other upstream 2189163 6690372 ~ 6690779 (+) True G9887
XR_006252402.1 other downstream 282158 9162611 ~ 9171915 (+) False olfm3b
TU15832 other downstream 866141 9746594 ~ 9751212 (+) True arpc5a
XR_006247735.1 other downstream 1031175 9911628 ~ 9916861 (+) True znf414
XR_006247736.1 other downstream 1031175 9911628 ~ 9915491 (+) False znf414
TU16308 other downstream 1830677 10711130 ~ 10718194 (+) True G10979

Expression Profile