RNA id: TU15736


Basic Information

Item Value
RNA id TU15736
length 1418
RNA type TUCP
GC content 0.47
exon number 5
gene id plppr5a
representative False

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 9491563 ~ 9519781 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TATTTCTGGCGGATTTACTCCGGAGGAGTAACAGTGGAATAACAGGAAATCATGCCAGTGCCGTCGTAGGAGCCGACCGAAGACTCTCCACTTCTTTCCCGggattgatctttttttttttgtttgtttaacccTCATTCGCAATGCTTTACTTTCAGCTGGTGATCATGGCAGGGACTGTCATGCTGGCGTACTACTTTGAGTACACCGACACTTTCAGCGTGCACATCCAGGGATTTTTCTGTCACGATAATGCCTACACGAAGCCCTATCTCGGACCGGAGGAGTCCAGTGCGATCCCCCCGGCCATCCTGTACGCGGTGGTCGCGGGGGTCCCGGCGCTCGTGGTGTGTACGCATTTGGCCTCTTTGCCACAGACATCTTTGTAAATGCCGGACAGGTGGTAACAGGAAATCTATCTCCATACTTCCTGACGGTGTGCAAACCCAACTACACAGCGCTGGGGTGCCAACAGGTGGTGCGTTTCATCAGCCAACAGGAACCCTGCACGGGCAACGAGGATGAAATCCTACATGCTCGCAAATCCTTTCCATCCAAAGAGGCGGCCATCAGTGTTTATGCAGCTCTTTATGTTGCCATGTACATCACATGCTCGGTGAAGGCCAAAGGGACGCGGCTGGCCAAGCCGGTGCTCTCTCTGGGGCTCATGTGTCTGGCCTTCCTAACTGGGATTAATCGAGTGGTGGAGTACCGCAACCACTGGTCTGATGTCATTGCTGGCTTCATCATCGGAGGAGCCATTGCTGTCTTTATGGTGGTGTGTGTGGTGAAAAATTTCAAAGGGAAGCCCTTACTGAGTGAGATACCGCCAGAGGAGAGTGTGTCCAGTGGTCCCATGATCACTCAGCCCAGGATGGAGCACACTATGGAGAAATACATAGCGTCCCAGaATCCCATCACGTACGCTGAGATCACATGACAGTGAAAAGCCAACTAGCCAGAATGCTGTGGATAATGTTGCTGCTCTCCAGTGCGACTTCTTCTTTTGAGTGCAACGTCGATATGTGCTAtttttacacttcttttttCAAGTGTGTGGAAAAAAATCATCTATACCTTGTTGTcctccttttaatttttttttttttttttttgagcaaagtTAGGGCAGGGTCGCATCCCTATTTTTATACGAACGTATAACTGTTACCATTTTAGTGGTTGAACATGCAGGGTATTGTGTGAATGTGGAATTGCAACACGATGTTCAATGAAATGTTTAACATATCCTGATGTACTATTTACAACCGTGAGTCAACCGTTGCATTTTGAAGAGGTTTCCGACTGACGAGAATTATTGTTGTTGATCCtcatagaaatcttttgtttccGCCTGCCGAAACATATCACATCGACATATTagaaaacagtttttcttttcagaacaGCGAACCGCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU15709 lncRNA downstream 39055 9457163 ~ 9461084 (-) True G10562
TU15716 lncRNA downstream 49213 9450560 ~ 9450926 (-) True G10569
TU15662 lncRNA downstream 168896 9327802 ~ 9331243 (-) True G10518
TU15546 lncRNA downstream 556546 8943099 ~ 8943593 (-) True G10438
TU15540 lncRNA downstream 570056 8929490 ~ 8930083 (-) True G10432
TU15788 lncRNA upstream 86116 9605638 ~ 9606195 (-) True G10621
TU15790 lncRNA upstream 92373 9611895 ~ 9612883 (-) False si:ch211-267e7.3
TU15912 lncRNA upstream 228865 9748387 ~ 9748740 (-) True G10708
TU16008 lncRNA upstream 406583 9926105 ~ 9927837 (-) True G10773
TU16050 lncRNA upstream 527296 10046818 ~ 10047373 (-) True G10812
XM_043260818.1 mRNA downstream 53357 9346029 ~ 9446782 (-) True dpydb
XM_043223736.1 mRNA downstream 229042 9263194 ~ 9271097 (-) True cnn3b
XM_043221234.1 mRNA downstream 249170 9248600 ~ 9250969 (-) True f3b
XM_043217093.1 mRNA downstream 261190 9212459 ~ 9238949 (-) False arhgap29b
XM_043217115.1 mRNA downstream 263286 9212459 ~ 9236853 (-) False arhgap29b
XM_043224923.1 mRNA upstream 51069 9570591 ~ 9577749 (-) True frrs1a
XM_043224931.1 mRNA upstream 52771 9572293 ~ 9577749 (-) False frrs1a
XM_043262413.1 mRNA upstream 86801 9606323 ~ 9618473 (-) True si:ch211-267e7.3
XM_043254644.1 mRNA upstream 129286 9648808 ~ 9651247 (-) True dusp12
XM_043261085.1 mRNA upstream 162451 9681973 ~ 9702207 (-) True tpra
TU15605 other downstream 312030 9187488 ~ 9188109 (-) False abca4b
XR_006253094.1 other downstream 1072236 8403327 ~ 8427903 (-) False zfyve9a
TU15203 other downstream 1392351 8106856 ~ 8107788 (-) True G10213
TU15175 other downstream 1428305 8070776 ~ 8071834 (-) True G10196
TU15155 other downstream 1714985 7784468 ~ 7785154 (-) True G10178
XR_006253077.1 other upstream 602245 10121767 ~ 10139585 (-) False pkn2a
TU16135 other upstream 622521 10142043 ~ 10143668 (-) False lmo4
TU16347 other upstream 856541 10376063 ~ 10378211 (-) True G11011
unassigned_transcript_206 other upstream 870029 10389551 ~ 10389623 (-) True trnak-cuu_1
TU16485 other upstream 1238506 10758028 ~ 10764891 (-) True G11102

Expression Profile