RNA id: TU16351



Basic Information


Item Value
RNA id TU16351
length 467
lncRNA type read_through
GC content 0.50
exon number 1
gene id fbxl7
representative False

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10392682 ~ 10421475 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggacggcttgggggtgagtaaagtGTGGGGTAATTTTAGCTTTtgggcaaactattcctttaacttttttttttatccatttatttatatttttattcacttatatatttttgattactCATCTTGTTTATGGCAGGTTGTATTACGTGTAACATGTACATTTCAATTTGTTGGCGTGTAAAGGATTACATGATGTGACGTTAACCAGAAACTAGACATATTTCCCAGAACTAAGGCGGTCCACGGTTCGTGTTTGTTGATGTTTACATTTGATATCTCTGTTATgaatgttttgctttgtttcatcATGTAAGCCTTGTAATAGCTTGGTTTCCATCTTGGTTTCATTGACCAGGAATATTTCAAACAGTGCCATTTTGCTGTGACGTTCACCTTTGTAATGGTCAATAAGGCTTTTTCAGGTGTTTAACAAATGGAAGACCACAGTGGAATAAAGAGGTCTAAGc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU16322 lncRNA downstream 72331 10318984 ~ 10320365 (-) False ca8
TU16318 lncRNA downstream 165840 10226218 ~ 10226856 (-) True G10987
TU16144 lncRNA downstream 232632 10158578 ~ 10160064 (-) True G10869
TU16114 lncRNA downstream 296994 10095217 ~ 10095702 (-) False hfm1
TU16112 lncRNA downstream 300038 10090936 ~ 10092658 (-) False hfm1
TU16411 lncRNA upstream 273315 10666477 ~ 10666712 (-) True G11057
TU16424 lncRNA upstream 274480 10667642 ~ 10668053 (-) False G11064
TU16425 lncRNA upstream 274652 10667814 ~ 10668967 (-) True G11064
TU16426 lncRNA upstream 274652 10667814 ~ 10668124 (-) False G11064
TU16423 lncRNA upstream 275900 10669062 ~ 10669414 (-) True G11063
XM_043255291.1 mRNA downstream 72293 10314033 ~ 10320403 (-) True ca8
XM_043259401.1 mRNA downstream 116669 10223331 ~ 10276027 (-) False tox
XM_043259420.1 mRNA downstream 116670 10223331 ~ 10276026 (-) False tox
XM_043220440.1 mRNA downstream 234675 10146582 ~ 10158021 (-) True hs2st1a
XM_043255931.1 mRNA downstream 248987 10140937 ~ 10143709 (-) True lmo4
XM_043259720.1 mRNA upstream 36632 10429794 ~ 10433121 (-) True LOC122359424
XM_043259604.1 mRNA upstream 72147 10465309 ~ 10476229 (-) True inhbab
XM_043259280.1 mRNA upstream 88508 10481670 ~ 10489280 (-) True afg3l2
XM_043259288.1 mRNA upstream 88508 10481670 ~ 10489279 (-) False afg3l2
XM_043259660.1 mRNA upstream 114161 10507323 ~ 10520967 (-) True ctdsplb
unassigned_transcript_206 other downstream 3073 10389551 ~ 10389623 (-) True trnak-cuu_1
TU16347 other downstream 14485 10376063 ~ 10378211 (-) True G11011
TU16135 other downstream 249028 10142043 ~ 10143668 (-) False lmo4
XR_006253077.1 other downstream 253111 10121767 ~ 10139585 (-) False pkn2a
TU15736 other downstream 873174 9500139 ~ 9519522 (-) False plppr5a
TU16485 other upstream 364866 10758028 ~ 10764891 (-) True G11102
TU16480 other upstream 374812 10767974 ~ 10861554 (-) False LOC122359216
TU16478 other upstream 376353 10769515 ~ 10783951 (-) False LOC122359216
TU16500 other upstream 407554 10800716 ~ 10803288 (-) True G11105
TU16716 other upstream 942569 11335731 ~ 11339597 (-) False trnau1apb

Expression Profile