RNA id: XM_043262715.1


Basic Information

Item Value
RNA id XM_043262715.1
length 5579
RNA type mRNA
GC content 0.50
exon number 33
gene id mast3a
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 11482104 ~ 11507704 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATGCCTGCCGTgcccaagcctccagtgccagcGCCTCGTGCTCAGCCCCGTCAGTGCCCGCCTGCGTCGCCCGTCCAGTGCCGCCTGCGATGCGCCCGTCAGTGCCCCGGCGCCTCGTCGCCCCGTCAATGCcagcgcctcgtgcgcccgtccaATGCCAGCGCCTCGATGTACGTCCAGTGCCAGCCTGCGTGCGCCCGTCAGATGCCAGCGCCTCGTGCGCTTCCGTCGATGCCGGCGCCTCGTCCGCCTCCTCAAGATAACCCACCCCCTCCCACCTTACCACCCGTCGGCGATGGATCAGCAGCCCCCtgctcatcctctgccctccacctggaggcTTTCGTACCCAGGTCTGTTGGTCTCCATTGCCGCCGTGGAGTGAAGAATCCTCAGCTTCATCGTCCGCCTCCGGGCCCGGACTCAGCTCGGCTTGTGGGCGTCTCGGCTTCCcttgggctcctagctcctcccTCTCCACCGttgctccgtcaatccaccagcttcaccaggctccatcgtctcgaCTACGCGCCCTGGCAGCAGTCCTCTCTGGACAGTCCCAGAAATGTCTGCAGTCCTTCGGTCAATTTTCCATTCATACGGAGACCAGACACACGAAGGTGGTCCGTGGCATCTGTCTCTGGATATGGAACCAATCCACCCAGTTCTGCTGTTTCAtcttcctcctcctcacaGGAGCTCCTGCACCAGCTGCCCTCCCAGCCCACCCCAGATGACCTCCATCGCCTCTTCAAGCATTTCAGGAGCTCAGAGAGTGTGGCAGATGAGGATGGACAGCCTCGCCTCCGTCCTCGGCCGAGGAGCCTTAGccCTGGGAGGACATGTGGCTCTTTTGATAACGAGATTGTGATGATGAATCACGTCTACAAAGAACGGTTTCCAAAGGCTACGGCTCAGATGGAGGGGCGTTTGCTGGCAGTGATTGCAGACTACTCCCCAGACAGAGCTCCTCCTCTTGCCGATGGAGTGCTGGGCTTCATTCAACACCAGCTGGTCGAGCTCGTCCGAGACTGTCTGGAGAAGTCCAGAAAGGGGCTCATCACATCCTGCTACTTTGTGGAACTTCAGGAAAAATTAGACAATTTCCTGCACGAGgcatATGAGCGCTCTGAGAGCGAGGAAGTGACTGTGATTGCCAAACTCGTGAAGAAGATTCTCATCATTATTTCCAGACCAGCAAGACTACTGGAGTGTCTGGAGTTTGACCCTGAGGAGTTTTATCAGCaCATGGTGCAGCTTGAGCACAACAACTCAGGCAGCCCAAGCAGAGATCTGGATGACACTGCAGAGAATCGTCAGGGAACCACAACGCCAAGAAAACCTCTGGAAAGAGACTTTGAGACTATAAAGCTCATCAGCAATGGGGCTTATGGGGCTGTGTACCTGGTAAGGCATCGCGGGACACGGCAGCGCTTTGCCATGAAGAAGATCAACCGGCAGAACTTGATCCTGAGGAACCAGATCCAGCAGGTGTTTGTGGAGCGAGACATCCTGACGTTTGCAGAGAACCCTTTTGTTGTCAGCATGTTCTGCTCCTTTGAGACACGAAGGCACCTCTGCATGGTCATGGAGTATGTGGAGGGTGGAGACTGTGCAAATTTGCTGAAGAATATGGGTCCCTTGCCGGTGGACATGGCCAGAATGTACTTTGCAGAGACTGTTCTGGCACTAGAGTATCTTCATAATTATGGTATCGTGCACAGGGATCTCAAACCTGACAACTTGCTCATTACGTCGATGGGGCACATTAAACTCACTGACTTCGGTCTGTCTAAAATCGGTTTAATGAACATGACCACAAACCTGTATGAAGAACACATGGAGAAAGACACAAGAGAGTTCATTGATAAACAGGTTTGTGGCACGCCAGAGTACATCGCGCCAGAGGTCATCCTCAGGCAAGGTTATGGGAAACCTGTGGATTGGTGGGCCATGGGTATTATTCTTTATGAGTTCCTGGTGGGCTGTGTGCCTTTCTTTGGAGACACACCAGAAGAGCTCTTTGGCCAGGTGGTCAGTGATGAAATTGAGTGGCCAGAGGGTGATGATGCATTGCCTCTTGAGTCTCAAGACCTCATCACAAAACTGCTAAGACAGAGTCCCAAAGAGCGCTTGGGAGCTGGTGGGTGTTTTGCCAGTCAAACATCACTTTTCTTTCATGGTCTGGACTGGAGTGGACTGTTAAGACAGAAAGCGGAGTTCATTCCACAGCTTGAAACTGAAGACGACACAAGTTACTTTGACACACGTTCTGACCGTTACCATCACTCTGAGGAGGACGATGAGACCAACGATGATGAGTCTTATCAGGAGATCAAGTTTTCTTCCTGCTCGCATCGCTTCAGCAAGGTGTACAGTAGCACCGAGCAGCTGGCTTCTCCGTCCAACTTGAGCCTGTCCTCCTCTGAGCGGAGCTGCAGTGAGGAGAAGGAGGACCGGTGGGACGGTCATTCAATGCTGTCTCCAGTTGAAAACCCAAGACAGCTACCAAGCAGCGACAGGAAGCAGGATTCCCACAGGGGCAGTCCAAGTCCGAGGCCGAGAGCATCGCCCAGTTCCTCTCAGCCTGAGAGGGGCACTAGTCCCCTAATTTTGAACAGCACTCAGAGTCTTGAGGCCATGCCACACTTTGCCTTTCCTGAGGATGAGGaagGTCTTGTGTCAAATCTCCGCGAATCGTCTGTCAAGAGCAACTCCACTGGAACAAGACCTACTAACCGCAGGGACCACAAGGGTCCGCGTCGCCTCGGGCTCCAGCAGGAGACCCCAGAGAAACCACGCTCACCATTTACATGCAAAGTCCCCAAGTCTGCATCCGTGTCTGGCCTTTCTCTCATCGTCACAGCAGATGATATCCCTGGTGGGCTCCAGACAAGCCCCATGTCTTCACACTCCCCTCTCATCCAATCCCCTTCATCTCGGGATTCTTCCCCTAACCGAGACCTCTCTCTTAGCATGAACAGTCTTCGTCCTCCTGTGGTCATTCACAGCTCTGGGAGGAAGTGCGGCTTTGCACTCGTGCGTGCCATTCGGGTCTACATGGGCGACACTGATGTCTACACAGTGCACCACATGGTCTGGAGCGTTGAAGACGGCAGTCCTGCTCACGAGGCCGGGCTGAGGGCTGGTAACCTCATCACTCATGTGAATGGAGAGTGTATCCAGGGTCTGGTGCACACCGATGTGGTGGAGCTTTTGCTGAAGagtgGCAGTAAAGTGACTCTACAGACGACTCCTCTTGAGAATACGTCCATTAAAATTGGGCCTGCGAGAAAGACCAGCTCCAAGGGGAAAATGGCACGACGCAGTAAAAAGAGCAAAAGGAAAGAGGGTCAAGACAGCAAACGGCGAAACCTTTTGAAGAAGCTGCCCAAACACAGTCCAGGGATTCAGAACAGTCGCAGTTTCTCGGCGGGTTTTCAGCACTCACCTAACGACAGCCTGTCTGACTCCCCGACGCCGAGCCTGTCTCCTGGGCCCAACACGCCGTGCAGAAGCCCAGCTCCAGACCTGTCATGTGATTCAAACTCTCCTCAGAGTTCCTCCCCCTGCTCGAGCTCTCCGAATTCTCCCATCCTCAAAGTCGACTCAAGTTCCCTTCACGTTTTGGGATCCAAGATTGGTCTCCGTTACAGCAAGGGAGGCCGCTGCAAGTCCACCAACAGTATTCCCCCCCCCCTCGCCTGCAATCCCTCCTCACAGCCTCTGTCTCCACAGTGTTCTCCATCGTCCCTCGCCGGAGCTCCTAAAAGCCTCCACTCGTTTCATAATAAGATGATGTCCCCTCCGACCATCGTGAGACAGACCGTGTGTCCTCGCAGCGCAGAATCACCTCGTTCGCCACTGCTGAGCAGGGTTCATTCATCCGAGAGGCCCTCCGGTGCTCAACATGGAGACAAAAAGGCCTTCTCCACTCGAAGACACACTGTGGAAGTTCCCCAGAGCGAAGCAGAGGGACTCGAGTCACAAACTAGTGACATTGCCTCAGTTTGTGTGTGTCGCGACCACGCTAGACAAGGGTTGTACCTGGCTGGCCAGCGCGAGGACTCTGGCGGTGTGGTTATGAGGAAGCTAAACTTGTCTGAGAGACGAGATTCGTTTAAGAAGCAGGAAGCTGTTCAGGAGGTCAGCTTTGATGACTCTGATGACAAGGAGGTCACGACATCTACACCAGTGCCATCTCATCCGCTTTTCAAAGCTGCGTGGATCAGCACAATGCAGGCGGAGGGAAGCTCTGAGACTTCGGCGAGTAAACCCGACGAGCTTGGATCCAAGCTAAGAGAACAGAGGAAACCAGAGGATGGCTGTTAGCCTTAGATAAGTCCAGAAAACTGTGAGACGGGTGCTTCCATTATCATTCAAATCAGAATCGTAGAGAAAACAGGAGTAGGGAGTCTTAGTTTAGTATCATTTATTTGTAGGTTAGAAGTCATTGACCTGCCAAACTGTCttattaaaaggatagttttctaataaatgaaaattctgtcattttttcccACCTCATAAACCTGAATAACTTACTTTCTGCTGTAGAACATTCACGAAAAAATGTCTGTTGTTTTTGAGCCCATTTAACTTTCATTGTGTAGACAAAAGCAGtcttaaatggatagttcacacTAAAATTCTCATTTACTAACTTCCATGCAGGTCcaaaagtctttttgtttttttgttttttgtatgaaaatatcTTAAAGAATGCAGGTAATCAAATAGTTAATGGTCCTCATTGACTTTCATACCATTTAtttccctactatggaagtcaaatGGGAAACCAACAAGAAATGACGCTAAAATGTTAatcttttgggtgaactattcctttaaaacattgTTGGCATTGTTTGTGTTCCACCAAAGTAAATgatatgacagaattttcctttttgggcAGATTATCCcttttatgaatttgttttaCCAGATAGCACAATAAACTTTTGTAgattttgaaagattttatttattacatttgttttatacaaGATGGGAATGGAAAGGTCATACAGTAGGATCGCTTTCTGAGAATTTGCACACATGTGGTCCTGCTGAGGTTCAATTACTGTTGTCTCTTCATTCTCATATCTCATTTATATCAGTAATATTGGCATATAACGTCATGTAACGTCTGAGTTGTCAACAAAAAGTAGTTATTATGTTgactaatattatttttttgccattttgcaaACTTGGATGCAGTCTTGTGTTGGTTCGGTCATACCCAATAATATCCCAGCACCTAAACAACGACTTGTGAGAAGCCATTTGGCCAATGTTGGTATTGTAGAGTATCATGTTTACCGGAGCATTGTTGTTCTCGTTACTTAGAAAGAACAAAGTGGATTATGAATACTAATTTGgtcacaactttttatttatgttttggaaTTGGTATGTGTTATAGCAGTGTTGTACAACTGAAATCATTTGACGTACGTAATCTTTAACAAATGGTTGCTCTGTCTTTTAGTGTTTTGTAGTCGGACTTGTGGAAATGTCTGTTCTCTTGAATTCACTCAACAGCCATGTGGGATGTTTTTGTG

Function

GO: NA

KEGG:

id description
K08789 MAST; microtubule-associated serine/threonine kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU16609 lncRNA upstream 25240 11456326 ~ 11456864 (+) True G11191
TU16608 lncRNA upstream 26696 11454258 ~ 11455408 (+) True G11190
TU16607 lncRNA upstream 27993 11453571 ~ 11454111 (+) True G11189
TU16604 lncRNA upstream 32671 11448763 ~ 11449433 (+) True G11186
TU16597 lncRNA upstream 33543 11446512 ~ 11448561 (+) True G11179
TU16626 lncRNA downstream 101547 11609251 ~ 11613566 (+) True LOC122328936
XR_006247857.1 lncRNA downstream 102771 11610475 ~ 11611087 (+) False LOC122328936
TU16629 lncRNA downstream 106537 11614241 ~ 11618863 (+) True G11207
TU16942 lncRNA downstream 593171 12100875 ~ 12101126 (+) True G11419
TU17037 lncRNA downstream 829963 12337667 ~ 12339049 (+) True G11505
XM_043217489.1 mRNA upstream 43387 11433089 ~ 11438717 (+) True angptl4
XM_043256208.1 mRNA upstream 58801 11422090 ~ 11423303 (+) False rps28
XM_043256200.1 mRNA upstream 58801 11422090 ~ 11423303 (+) False rps28
XM_043258084.1 mRNA upstream 114453 11360339 ~ 11367651 (+) True nr2f6a
XM_043264008.1 mRNA downstream 1008 11508712 ~ 11535896 (+) True pik3r2
XM_043264015.1 mRNA downstream 3596 11511300 ~ 11535896 (+) False pik3r2
XM_043264027.1 mRNA downstream 29261 11536965 ~ 11538807 (+) True ifi30
XM_043264040.1 mRNA downstream 31245 11538949 ~ 11540984 (+) True mpv17l2
XM_043264050.1 mRNA downstream 31245 11538949 ~ 11540984 (+) False mpv17l2
TU16565 other upstream 140993 11339863 ~ 11341111 (+) False mrpl34
TU16555 other upstream 225340 11240126 ~ 11256764 (+) False kcnh2a
TU16308 other upstream 763910 10711130 ~ 10718194 (+) True G10979
XR_006247735.1 other upstream 1565243 9911628 ~ 9916861 (+) True znf414
XR_006252734.1 other downstream 400369 11908073 ~ 11937590 (+) False pld1a
XR_006247874.1 other downstream 772207 12279911 ~ 12280014 (+) True LOC122328992
XR_006247873.1 other downstream 772886 12280590 ~ 12280659 (+) True LOC122328989
XR_006247863.1 other downstream 773668 12281372 ~ 12281504 (+) True LOC122328950
TU17183 other downstream 1116119 12623823 ~ 12626387 (+) True LOC122358236

Expression Profile