RNA id: TU16757



Basic Information


Item Value
RNA id TU16757
length 777
lncRNA type sense_over
GC content 0.37
exon number 1
gene id crsp7
representative False

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 11447089 ~ 11453203 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCCCTTTCAACAGACGAACTGGGAAGATCTGCCCAGAAACGAAATCATTCAATCGTACCTTAACCTTCAGAGCAACGTTCTCACATCCTCTGGAGCACAGAGCCACGGGGCGCACATTTTCATGACTAAATATTTTAAGCGAGAAGAACACGACGTCAAAGAGTCCCGGAAAACGCATGCGTTAGTAGCGAGCAGCTCCCCGACAGAACTACCCGGGGTGACCCGGGAGGTAACGAACGAGGACCTTCTCAGAATACACAACGAACACTGGCCGGGCGTGAACGGTTGTTTTGACACCAAGGGAGCCTGGTTCGATTGGACAGAGTGTATATCGTTGGATCCTCACGGCGATGAAACTAAATTGAACATCCTGCCATATGTTTGCCTAGACTGAGAGAACAGGGCTTGGAAGAGTTTTCAATGTTCCCACTGTGAGTCGAAGGAGATCAGAGCGACTCTCCTCGTCACTCTGTAATAGGTTCATCTTACAGGTGTAAAGAACGAACCAACGGCGGTTGTTCCGAGTTTGGTTTTCCACAAGAAGGAGCTGAAGTGGCGTCCTGTTTGTAATGTGCTGCTACCAACAAGAATTTGCAAACAAGGGTTGTATATAATGGCTCGCAGGGATTTCACTGGGCCAGTTCTTGCACAACGTGTGAATAGGAGGGTCTGAGCAAGCATTGAGCAGTACAGATATGTTTAAAAGCAAGTCGAGAACATTTTTTGGCAGTTACAAAAAAGCTTTATGTGAcaaagaataaattataaaagtttCTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006247844.1 lncRNA downstream 6919 11440002 ~ 11440899 (-) True LOC122328878
TU16732 lncRNA downstream 24387 11422670 ~ 11423431 (-) True G11263
TU16711 lncRNA downstream 108221 11335731 ~ 11339597 (-) False trnau1apb
TU16760 lncRNA upstream 5664 11454258 ~ 11455403 (-) True G11280
TU16761 lncRNA upstream 7732 11456326 ~ 11456854 (-) True G11281
TU16776 lncRNA upstream 64034 11512628 ~ 11513282 (-) True G11292
TU16777 lncRNA upstream 73397 11521991 ~ 11522473 (-) True G11293
TU16778 lncRNA upstream 75432 11524026 ~ 11524229 (-) True G11294
XM_043220314.1 mRNA downstream 2708 11440990 ~ 11445110 (-) True cnn2
XM_043222048.1 mRNA downstream 27084 11417942 ~ 11420734 (-) True si:rp71-39b20.4
XM_043253728.1 mRNA downstream 32973 11414306 ~ 11414845 (-) True insl3
XM_043264350.1 mRNA downstream 42139 11379243 ~ 11405679 (-) True kcnn1a
XM_043262689.1 mRNA upstream 9857 11458451 ~ 11467496 (-) True crtc1a
XM_043262700.1 mRNA upstream 27027 11475621 ~ 11476171 (-) True LOC122361755
XM_043224954.1 mRNA upstream 157040 11605634 ~ 11614938 (-) True hltf
XM_043224945.1 mRNA upstream 157040 11605634 ~ 11614937 (-) False hltf
XM_043225023.1 mRNA upstream 167229 11615823 ~ 11624104 (-) True nck1a
TU16731 other downstream 2705 11442418 ~ 11445113 (-) False cnn2
XR_006253162.1 other downstream 42118 11382106 ~ 11405700 (-) False kcnn1a
XR_006253161.1 other downstream 42121 11382106 ~ 11405697 (-) False kcnn1a
TU16716 other downstream 108221 11335731 ~ 11339597 (-) False trnau1apb
TU16480 other downstream 586264 10767974 ~ 10861554 (-) False LOC122359216
TU16759 other upstream 164 11448758 ~ 11449423 (-) False crsp7
TU16758 other upstream 941 11449535 ~ 11452920 (-) False crsp7
TU16802 other upstream 127797 11576391 ~ 11577516 (-) True G11317
TU17467 other upstream 2105258 13553852 ~ 13558004 (-) False LOC122328470
TU17469 other upstream 2105258 13553852 ~ 13558004 (-) False LOC122328470

Expression Profile