RNA id: TU16781



Basic Information


Item Value
RNA id TU16781
length 401
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G11297
representative True

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 11527943 ~ 11528343 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ttataaatgcattatcatgtactccaaaaaaaagacatgttagaattatttctgaaggatcaagtgacactgaagactggattaatggcCACCAAAATTTCTGttttgccattacaggaataaattatattataaaacgcattaaaaaagtacattttaataaaaaattgttacattatGAATTGATTTGgcaacacaatatatatatttggggtGTTCTTACACAAGGTATTGGTCCCGTAGCTTCCTCAGCTGTATGAGGTCTGGTTTCAAGCTGTTCATCCTCTTGTCTATCTCTCGATTGTCTGTAGCTTGTCGCTTCAAGTCCAGTTCCAACTTACTCTTGCTGTCATGAATCTCTGTCACTCTGGATTTCAGCTTCTCAGAGTTGCTCTGAATTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU16780 lncRNA downstream 322 11527251 ~ 11527621 (-) True G11296
TU16779 lncRNA downstream 1591 11525867 ~ 11526352 (-) True G11295
TU16778 lncRNA downstream 3714 11524026 ~ 11524229 (-) True G11294
TU16777 lncRNA downstream 5470 11521991 ~ 11522473 (-) True G11293
TU16776 lncRNA downstream 14661 11512628 ~ 11513282 (-) True G11292
TU16788 lncRNA upstream 13364 11541707 ~ 11541957 (-) True G11303
TU16789 lncRNA upstream 17415 11545758 ~ 11546268 (-) True G11304
TU16790 lncRNA upstream 22489 11550832 ~ 11551484 (-) True G11305
TU16793 lncRNA upstream 30461 11558804 ~ 11559651 (-) True G11308
TU16794 lncRNA upstream 31570 11559913 ~ 11560166 (-) True G11309
XM_043262700.1 mRNA downstream 51772 11475621 ~ 11476171 (-) True LOC122361755
XM_043262689.1 mRNA downstream 60447 11458451 ~ 11467496 (-) True crtc1a
XM_043223724.1 mRNA downstream 74740 11447089 ~ 11453203 (-) True crsp7
XM_043220314.1 mRNA downstream 82833 11440990 ~ 11445110 (-) True cnn2
XM_043222048.1 mRNA downstream 107209 11417942 ~ 11420734 (-) True si:rp71-39b20.4
XM_043224954.1 mRNA upstream 77291 11605634 ~ 11614938 (-) True hltf
XM_043224945.1 mRNA upstream 77291 11605634 ~ 11614937 (-) False hltf
XM_043225023.1 mRNA upstream 87480 11615823 ~ 11624104 (-) True nck1a
XM_043255143.1 mRNA upstream 99802 11628145 ~ 11631800 (-) True slc35g2a
XM_043262837.1 mRNA upstream 151570 11679913 ~ 11685059 (-) True pccb
TU16758 other downstream 75023 11449535 ~ 11452920 (-) False crsp7
TU16759 other downstream 78520 11448758 ~ 11449423 (-) False crsp7
TU16731 other downstream 82830 11442418 ~ 11445113 (-) False cnn2
XR_006253162.1 other downstream 122243 11382106 ~ 11405700 (-) False kcnn1a
TU16802 other upstream 48048 11576391 ~ 11577516 (-) True G11317
TU17467 other upstream 2025509 13553852 ~ 13558004 (-) False LOC122328470
TU17469 other upstream 2025509 13553852 ~ 13558004 (-) False LOC122328470
TU17470 other upstream 2025509 13553852 ~ 13554619 (-) False LOC122328470
TU17472 other upstream 2030879 13559222 ~ 13560265 (-) False LOC122328470

Expression Profile