RNA id: TU16874



Basic Information


Item Value
RNA id TU16874
length 324
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G11366
representative True

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 11817020 ~ 11819799 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAGAAAGAGCTATTGGGAATCACAGGGTCTGATTCTTTTTTCCGCGCTGGCCGGAGGAAACACGGCCGGGGCGCTGTATCTGCAGCACCTGGAGAAGAGATCAGAACAGACTGATCCGCTCTGATAGAGCAGATCTACAGAGAGATGTGCGAGAGAAATGTGAAGCACGCCTGAGGGCTTGCAGCGTTCCTTGAATGTCTAATGTAAGATGACTACAATGTTCCTCATTGACCAAAATACCGACCGGGATGTTTCTGGCTTTGTTTTCCTTCAGGAATTAGTGAGAAAGAGCCTATGTCAGTTGAATTTATAGTAACGGCTGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU16851 lncRNA downstream 34619 11780111 ~ 11782401 (-) True G11350
XR_006253027.1 lncRNA downstream 163168 11650743 ~ 11653852 (-) True LOC122361822
TU16659 lncRNA downstream 210418 11592441 ~ 11606602 (-) False hltf
TU16661 lncRNA downstream 216041 11596111 ~ 11600979 (-) True G11231
TU16662 lncRNA downstream 216041 11596111 ~ 11600979 (-) False G11231
TU16950 lncRNA upstream 123334 11943133 ~ 12033080 (-) False G11425
TU16951 lncRNA upstream 208336 12028135 ~ 12031725 (-) True G11426
TU16949 lncRNA upstream 212029 12031828 ~ 12033080 (-) True G11425
TU16955 lncRNA upstream 215210 12035009 ~ 12036429 (-) True G11429
TU17110 lncRNA upstream 451944 12271743 ~ 12272390 (-) True G11549
XM_043253700.1 mRNA downstream 122542 11691551 ~ 11694478 (-) True nceh1a
XM_043262837.1 mRNA downstream 131961 11679913 ~ 11685059 (-) True pccb
XM_043255143.1 mRNA downstream 185220 11628145 ~ 11631800 (-) True slc35g2a
XM_043225023.1 mRNA downstream 192916 11615823 ~ 11624104 (-) True nck1a
XM_043224945.1 mRNA downstream 202083 11605634 ~ 11614937 (-) False hltf
XM_043219166.1 mRNA upstream 81281 11901080 ~ 11903958 (-) True ghsra
XM_043218296.1 mRNA upstream 272566 12092365 ~ 12094581 (-) True cldn11a
XM_043253555.1 mRNA upstream 442117 12261916 ~ 12266122 (-) True rabggtb
XM_043262127.1 mRNA upstream 447286 12267085 ~ 12270472 (-) True acadm
XM_043219208.1 mRNA upstream 462283 12282082 ~ 12286011 (-) True best4
TU16802 other downstream 239504 11576391 ~ 11577516 (-) True G11317
TU16758 other downstream 364100 11449535 ~ 11452920 (-) False crsp7
TU16759 other downstream 367597 11448758 ~ 11449423 (-) False crsp7
TU16731 other downstream 371907 11442418 ~ 11445113 (-) False cnn2
XR_006253161.1 other downstream 411323 11382106 ~ 11405697 (-) False kcnn1a
TU17467 other upstream 1734053 13553852 ~ 13558004 (-) False LOC122328470
TU17469 other upstream 1734053 13553852 ~ 13558004 (-) False LOC122328470
TU17470 other upstream 1734053 13553852 ~ 13554619 (-) False LOC122328470
TU17472 other upstream 1739423 13559222 ~ 13560265 (-) False LOC122328470
TU17473 other upstream 1740530 13560329 ~ 13564329 (-) False LOC122328470

Expression Profile