RNA id: TU18465


Basic Information

Item Value
RNA id TU18465
length 567
lncRNA type sense_over
GC content 0.35
exon number 1
gene id dars2
representative False

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 15860179 ~ 15875764 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TACCAAATAAAGctacatttcagtttttctcaGCGATGCCTTATCTGCAAAAGCAGATGCTCATTTTTCATGCCCAGGTACAGCTACTCATTACAGCCagtgttgttttaaagcagaCCTGCGAGTTGGCCGCCAAGCTGTGAACACAGTTTTTTGTAAGACATGCTGTTTTTGCTGTTCTTCCAATGACTTTTCCTTAAGTACCCACTCATTGCTTATTTACATGACTGTGTCTACTAAGAAGTACCTGCCTACATTTGGTAGATGTTTCCACTAGTGCTTTAGGGACAATTGCAGAACTGAACCATGGCTGATTGATATAGAGCTTTTCATTAATAGtttataaatagtttataaaaagtcaattttCTAATTCTGGTTTGGGCTTTAGAATGTTCTTATGCATCTTAAAAAAGGCATAGTTCATctaaacatgaaattaaattcCAGACTGCCATTATTTTCTTCAGGTGGagcacaaaataacattttctctttttgtcaaGAGAATTGTACcctcttatttatatatatgcaaaaaacactgaaaatccacaataaagattt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU18436 lncRNA upstream 63791 15810893 ~ 15811393 (+) True G12451
TU18414 lncRNA upstream 70263 15723086 ~ 15804921 (+) True G12432
XR_006252280.1 lncRNA upstream 132386 15731830 ~ 15742798 (+) True LOC122356092
TU18415 lncRNA upstream 133583 15731819 ~ 15741601 (+) False LOC122356092
TU18398 lncRNA upstream 196738 15676203 ~ 15678446 (+) True G12419
TU18481 lncRNA downstream 2384 15878134 ~ 15878404 (+) True G12491
XR_006252739.1 lncRNA downstream 157007 16032757 ~ 16034626 (+) False LOC122359940
TU18505 lncRNA downstream 157022 16032772 ~ 16034908 (+) True LOC122359940
TU18524 lncRNA downstream 388024 16263774 ~ 16264920 (+) True G12530
TU18588 lncRNA downstream 574403 16450153 ~ 16456532 (+) False LOC122323293
XM_043217539.1 mRNA upstream 18429 15849084 ~ 15856755 (+) True klhl20
XM_043254489.1 mRNA upstream 113430 15754575 ~ 15761754 (+) True kif2c
XM_043254490.1 mRNA upstream 113430 15754575 ~ 15761754 (+) False kif2c
XM_043254165.1 mRNA upstream 169613 15694208 ~ 15705571 (+) True kiss1ra
XM_043218409.1 mRNA upstream 290011 15580143 ~ 15585173 (+) True zgc:113531
XM_043260157.1 mRNA downstream 156233 16031983 ~ 16224471 (+) False astn1
XM_043260150.1 mRNA downstream 156234 16031984 ~ 16224471 (+) True astn1
XM_043260163.1 mRNA downstream 156234 16031984 ~ 16224471 (+) False astn1
XM_043260171.1 mRNA downstream 156234 16031984 ~ 16224471 (+) False astn1
XM_043220484.1 mRNA downstream 399320 16275070 ~ 16285558 (+) True cop1
XR_006252462.1 other upstream 1092207 14776322 ~ 14782977 (+) False ackr4a
XR_006252465.1 other upstream 1092480 14776322 ~ 14782704 (+) False ackr4a
TU17566 other upstream 1695569 14175364 ~ 14179615 (+) True G11854
TU17573 other upstream 1695569 14175364 ~ 14179615 (+) False G11854
TU17265 other upstream 3002039 12867983 ~ 12873145 (+) False rnf152
TU18526 other downstream 391293 16267043 ~ 16268797 (+) True G12531
TU18915 other downstream 1156569 17032319 ~ 17037297 (+) False golim4b
XR_006252905.1 other downstream 1486495 17362245 ~ 17367861 (+) False sppl2
TU19352 other downstream 1691091 17566841 ~ 17567916 (+) True G13114
TU19349 other downstream 1731502 17607252 ~ 17608092 (+) True G13111

Expression Profile