RNA id: TU18751



Basic Information


Item Value
RNA id TU18751
length 624
lncRNA type inter_gene
GC content 0.36
exon number 2
gene id G12669
representative True

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 16783900 ~ 16784544 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gattatatttttatatgggTAGAGTTAGGAtcagggtttggtttagggttagttgcatgtaattatacataatttagtattataatagaaaGTACATGTGAGATGtgcaacaaggacaccttaaggGGTTacccagtttttatttttttaaagcgacATCTGTAAATAACGGGCGAAAGACACACACGCCCAAATTTCTAAACTTGTCCACATCATCCGGGAAGTGTGTTGTGTTTTCCATGGTTTAAAACCAGAGCTGTGTGAAGCGGAAAACCGAGCTCTCGAGATAGAGCAGCTGTCAGATCTGAGCCTGTAAACCCCACGCAGACACAAAGCCCACATCCACAGCACCTGCTGTTCACGCAAACAAAATCACTCACACTTCCTGttgatgtttttctgtgtcATCTTCGTTCGAGgattgcaaaatattaaaatgttttattcaaatatattataatcatAGCACCTTTGCAATGGAAGGTATGAGAATGCAGcgtgtgtataaaataaatatcggTAAAGCCTGTTTATTAATctcttattttttgtgtttatttgcattgtacAGCAGTTTAAAAGATGTTCTGCCTGTTTAGATTAGATTATGACAATAAAAAATTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU18741 lncRNA upstream 7549 16731737 ~ 16776351 (+) False LOC122361622
TU18738 lncRNA upstream 7549 16733221 ~ 16776351 (+) False LOC122361622
TU18740 lncRNA upstream 7549 16734805 ~ 16776351 (+) False LOC122361622
TU18737 lncRNA upstream 7549 16736374 ~ 16776351 (+) False LOC122361622
TU18743 lncRNA upstream 7549 16748063 ~ 16776351 (+) False LOC122361622
TU18819 lncRNA downstream 42486 16827030 ~ 16829326 (+) True G12729
XR_006252365.1 lncRNA downstream 45564 16830108 ~ 16834314 (+) False LOC122356672
TU18820 lncRNA downstream 46105 16830649 ~ 16831883 (+) True G12730
TU18821 lncRNA downstream 48516 16833060 ~ 16839463 (+) True LOC122356672
TU18800 lncRNA downstream 55027 16839571 ~ 16842431 (+) True G12711
XM_043262502.1 mRNA upstream 7553 16724614 ~ 16776347 (+) False LOC122361622
XM_043262494.1 mRNA upstream 7553 16728439 ~ 16776347 (+) False LOC122361622
XM_043262612.1 mRNA upstream 7553 16731516 ~ 16776347 (+) False LOC122361622
XM_043262442.1 mRNA upstream 7553 16732336 ~ 16776347 (+) False LOC122361622
XM_043262580.1 mRNA upstream 7553 16732914 ~ 16776347 (+) False LOC122361622
XM_043255548.1 mRNA downstream 59177 16843721 ~ 16847555 (+) True LOC122356618
XM_043220730.1 mRNA downstream 210145 16994689 ~ 16996615 (+) True ing5b
XM_043220723.1 mRNA downstream 210149 16994693 ~ 16996615 (+) False ing5b
XM_043220682.1 mRNA downstream 212545 16997089 ~ 17009227 (+) True pak2a
XM_043220670.1 mRNA downstream 225022 17009566 ~ 17014352 (+) True klhl6
TU18526 other upstream 515103 16267043 ~ 16268797 (+) True G12531
XR_006252462.1 other upstream 2000923 14776322 ~ 14782977 (+) False ackr4a
XR_006252465.1 other upstream 2001196 14776322 ~ 14782704 (+) False ackr4a
TU17566 other upstream 2604285 14175364 ~ 14179615 (+) True G11854
TU18915 other downstream 247775 17032319 ~ 17037297 (+) False golim4b
XR_006252905.1 other downstream 577701 17362245 ~ 17367861 (+) False sppl2
TU19352 other downstream 782297 17566841 ~ 17567916 (+) True G13114
TU19349 other downstream 822708 17607252 ~ 17608092 (+) True G13111
XR_006247303.1 other downstream 994795 17779339 ~ 17782364 (+) False LOC122325453

Expression Profile