RNA id: TU19305


Basic Information

Item Value
RNA id TU19305
length 272
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G13076
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 17480223 ~ 17480494 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCGGATGACCTACTTCCTCTTCAATATTTATGAATGGCAGTGGCTTGATGCATCTGACGCTGGAAGGTCAGGTGACAATAACAACATGGTGAATGCAGTACGGCCAGATGGGAAGGGAAGCTAACACTGGATTTAGACATGCCTCCGTTTTCCGGATGCACTCAGTGGCTGAATCTGAAATCACCCCTATAGCCTCTAATAGGGCACCATTAGAGGGGACAGCCATTTAAGTGATGACCCAACCACAGTGGACATTCTCGAGTGCACTCatt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU19304 lncRNA upstream 121 17479724 ~ 17480102 (+) True G13075
TU19206 lncRNA upstream 92675 17386062 ~ 17387548 (+) True G13007
TU19186 lncRNA upstream 194393 17281260 ~ 17285830 (+) True G12995
TU19164 lncRNA upstream 207061 17272654 ~ 17273162 (+) True G12977
TU19172 lncRNA upstream 273742 17204414 ~ 17206481 (+) True G12985
TU19267 lncRNA downstream 46683 17527177 ~ 17529390 (+) True G13049
TU19266 lncRNA downstream 48507 17529001 ~ 17529390 (+) False G13049
XR_006252552.1 lncRNA downstream 129656 17610150 ~ 17612100 (+) True LOC122357958
TU19350 lncRNA downstream 195578 17676072 ~ 17678382 (+) True G13112
TU19359 lncRNA downstream 219095 17699589 ~ 17699825 (+) True G13121
XM_043220234.1 mRNA upstream 1283 17473538 ~ 17478940 (+) True myadmb
XM_043220242.1 mRNA upstream 1283 17473587 ~ 17478940 (+) False myadmb
XM_043262116.1 mRNA upstream 111121 17362245 ~ 17369102 (+) True sppl2
XM_043253028.1 mRNA upstream 137164 17333859 ~ 17343059 (+) True phc3
XM_043223790.1 mRNA downstream 210 17480704 ~ 17485854 (+) True ftr66
XM_043221436.1 mRNA downstream 20849 17501343 ~ 17506122 (+) True ltb4r2b
XM_043255265.1 mRNA downstream 28292 17508786 ~ 17511815 (+) True sdr39u1
XM_043255276.1 mRNA downstream 28292 17508786 ~ 17511815 (+) False sdr39u1
XM_043253119.1 mRNA downstream 38318 17518812 ~ 17524769 (+) True parp2
XR_006252905.1 other upstream 112362 17362245 ~ 17367861 (+) False sppl2
TU18915 other upstream 442926 17032319 ~ 17037297 (+) False golim4b
TU18526 other upstream 1211426 16267043 ~ 16268797 (+) True G12531
XR_006252462.1 other upstream 2697246 14776322 ~ 14782977 (+) False ackr4a
TU19352 other downstream 86347 17566841 ~ 17567916 (+) True G13114
TU19349 other downstream 126758 17607252 ~ 17608092 (+) True G13111
XR_006247303.1 other downstream 298845 17779339 ~ 17782364 (+) False LOC122325453
TU19377 other downstream 303685 17784179 ~ 17816764 (+) True G13137
XR_006247815.1 other downstream 2935709 20416203 ~ 20429345 (+) False crlf1a

Expression Profile