Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU20595 |
| length | 465 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 2 |
| gene id | G13964 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056700.1 |
| NCBI id | CM032069.1 |
| chromosome length | 25613461 |
| location | 20899564 ~ 20946266 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0005886 | plasma membrane | cellular_component |
| GO:0071944 | cell periphery | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU20511 | lncRNA | upstream | 281904 | 20616158 ~ 20617660 (+) | True | G13909 |
| TU20455 | lncRNA | upstream | 304471 | 20591718 ~ 20595093 (+) | False | G13863 |
| TU20456 | lncRNA | upstream | 304471 | 20591718 ~ 20595093 (+) | True | G13863 |
| TU20494 | lncRNA | upstream | 366826 | 20532212 ~ 20532738 (+) | True | G13896 |
| TU20474 | lncRNA | upstream | 396225 | 20492928 ~ 20503339 (+) | False | G13880 |
| TU20620 | lncRNA | downstream | 9669 | 20955935 ~ 20957136 (+) | True | G13980 |
| TU20610 | lncRNA | downstream | 15427 | 20961693 ~ 20966228 (+) | True | G13976 |
| TU20640 | lncRNA | downstream | 201914 | 21148180 ~ 21148512 (+) | True | G13992 |
| TU20641 | lncRNA | downstream | 202955 | 21149221 ~ 21150007 (+) | True | G13993 |
| TU20642 | lncRNA | downstream | 204392 | 21150658 ~ 21151136 (+) | True | G13994 |
| XM_043263535.1 | mRNA | upstream | 12020 | 20854977 ~ 20887544 (+) | True | efr3a |
| XM_043263525.1 | mRNA | upstream | 12020 | 20854977 ~ 20887544 (+) | False | efr3a |
| XM_043263517.1 | mRNA | upstream | 12020 | 20859022 ~ 20887544 (+) | False | efr3a |
| XM_043257567.1 | mRNA | upstream | 107706 | 20778714 ~ 20791858 (+) | True | basp1 |
| XM_043257497.1 | mRNA | upstream | 121511 | 20772536 ~ 20778053 (+) | True | LOC122357864 |
| XM_043261627.1 | mRNA | downstream | 29273 | 20975539 ~ 21044413 (+) | True | pard3ab |
| XM_043261665.1 | mRNA | downstream | 29273 | 20975539 ~ 21044413 (+) | False | pard3ab |
| XM_043261645.1 | mRNA | downstream | 29273 | 20975539 ~ 21044413 (+) | False | pard3ab |
| XM_043261655.1 | mRNA | downstream | 29273 | 20975539 ~ 21044413 (+) | False | pard3ab |
| XM_043261671.1 | mRNA | downstream | 29273 | 20975539 ~ 21040956 (+) | False | pard3ab |
| TU20478 | other | upstream | 395341 | 20493442 ~ 20504223 (+) | False | LOC122326305 |
| TU20479 | other | upstream | 414346 | 20481664 ~ 20485218 (+) | True | G13882 |
| XR_006247459.1 | other | upstream | 426948 | 20467268 ~ 20472616 (+) | False | gbp2 |
| XR_006247815.1 | other | upstream | 470219 | 20416203 ~ 20429345 (+) | False | crlf1a |
| TU19377 | other | upstream | 3082800 | 17784179 ~ 17816764 (+) | True | G13137 |
| TU20649 | other | downstream | 217676 | 21163942 ~ 21164822 (+) | True | G13998 |
| TU20650 | other | downstream | 218031 | 21164297 ~ 21164822 (+) | False | G13998 |
| TU21005 | other | downstream | 361141 | 21307407 ~ 21361708 (+) | False | G14211 |
| TU21007 | other | downstream | 391416 | 21337682 ~ 21361708 (+) | True | G14211 |
| TU21008 | other | downstream | 391416 | 21337682 ~ 21361708 (+) | False | G14211 |
