RNA id: TU21005


Basic Information

Item Value
RNA id TU21005
length 1609
RNA type TUCP
GC content 0.50
exon number 2
gene id G14211
representative False

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 21307407 ~ 21361708 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtttgtatgtgtgtgtagaaagaaagagagagttgTCTGTCACGTAACAAGAGGAAACCATTCTGCCACTATTACAGCTCTCACAagatgtcagtgtgtgtgtaatggatGGCTCTCAGCTCTTGGTTTTCTTGtgaatgtgtgattttttttttttttaagactgtgTCCTAACCAGGTGCGGcacaacaacttttttttccctgaaagcAAAAACCGAGCGCCGTTTCACAGAACAGATGTACAATATACGTTTCGAGTGGGGTTCAAAAGTCCACGATGATAATCTGGGATTTGAGCTAATTTATACCTGGAAACATTCCAGAAGGTTTTAGGATTTAAAATTTGTAGCGTAATGAGAAATACTGTGCACGTAAATTCGTTTGTACAGTAAGATGTTCTTGCTTCCACTCGAGCTCAAGATGAACTTTGGATCATCTCAAATCAGGTTTTACGCAAACTTATGGAATTCAAGCAGAATGCTGCTGTTAAAGCAAGCGAAAGACAAATCAAACACTAACAGATTCTGAAattcacataatttttttcagttccTATATAATCAAAAATTGTTAAGCTTATTACATAgctcatcattaaaaaaatgcaaaaatgcaaaatagaagCTATTCCGGATTTTGAACCTCACTGAATGCGGCGAATGCTTTTGAATGAAGAAGATCTGAATGTGGGCGGAGCTACACAGCTAAACATAACTAGGACAGATAGAATACAGGGTAAAATATCTTGTCACAGCTGCAAGTAAATTTATAGATATTGTGTTTGTAGACTTGTCGTGCAGCACATAGATTGGACacagtcttttatttttttaggaacCACTCTTTTTTTCCGTTTGGAATTGGATTAAAATGAGACAAACATCACCCCTCTCCTGTCCTCCTGTTTTGTAAGGATTTGTCTTTATCTCCTTGCCTCCAAAACTCTCCACCACCCCCTCTTTTCATACCCGTCTCTCTCACTTGAGAGTGAATCTGCGAGCAAGTTGAGAAAAGAACGCAGCGGGACTCGATTTAGTTtgccctccctctctctcctgttTAGTGAGCTCTAGCTCAATGGTCATAAGAACCCTGTCCTGCCTGCCCATCCCCGCTGCCTCTTCCTGGGCTTGGGTCTGGGTGGAGGCGGCCCCGCTCAGGAGCTCTAGCTCTCTGCTCCACAATCCCTATTTCTTCTCCCTGCGAGActcttgtttcttcttctctgatGCTGCCGCCTTCAGCTTGGCCGGATCCGTCACAGCCAAAGCctggaaagagagagggagtgtggAGAGGGAAGGAGTGAGTCACTAcgggaggaaagagagagagagagagagagagagagagagagagaactagaagaataaaaagaaagcaagaatgagaaagagagaggggagaaggagaaagaaggGCTTGTGGGTTAGGTGGGAATGGTCAGATGAGTTTAACGGATATGAGAAACCAGAATAAGGGAGGTAGTTTCATtacagaagagaagaagaagaaaaagagagagaaatgctaAACGAGGGGTTAGAAGGAGATGAACACCAGGGGAACTTTCGGTTTCTGGAAAGGGAGGACAAAACAGGAAGTGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU20627 lncRNA upstream 138520 21166088 ~ 21168887 (+) True G13983
TU20644 lncRNA upstream 153625 21152103 ~ 21153782 (+) True G13995
TU20642 lncRNA upstream 156271 21150658 ~ 21151136 (+) True G13994
TU20641 lncRNA upstream 157400 21149221 ~ 21150007 (+) True G13993
TU20640 lncRNA upstream 158895 21148180 ~ 21148512 (+) True G13992
TU21010 lncRNA downstream 4100 21365808 ~ 21370499 (+) True G14212
TU21083 lncRNA downstream 171537 21533245 ~ 21621097 (+) False ece2a
TU21112 lncRNA downstream 195136 21556844 ~ 21557398 (+) True G14285
TU21152 lncRNA downstream 355063 21716771 ~ 21717992 (+) True G14315
TU21153 lncRNA downstream 358210 21719918 ~ 21720575 (+) True G14316
XM_043218333.1 mRNA upstream 61407 21227323 ~ 21246000 (+) False nlrb5
XM_043218330.1 mRNA upstream 61407 21228639 ~ 21246000 (+) True nlrb5
XM_043218349.1 mRNA upstream 61407 21228639 ~ 21246000 (+) False nlrb5
XM_043218341.1 mRNA upstream 61407 21228639 ~ 21246000 (+) False nlrb5
XM_043260565.1 mRNA upstream 102534 21185209 ~ 21204873 (+) True arhgap12a
XM_043254496.1 mRNA downstream 29410 21391118 ~ 21397540 (+) True zgc:152670
XM_043254497.1 mRNA downstream 29410 21391118 ~ 21397540 (+) False zgc:152670
XM_043219271.1 mRNA downstream 62118 21423826 ~ 21462693 (+) True kcnab1b
XM_043219247.1 mRNA downstream 101090 21462798 ~ 21474564 (+) True pask
XM_043219257.1 mRNA downstream 101091 21462799 ~ 21474564 (+) False pask
TU20649 other upstream 142585 21163942 ~ 21164822 (+) True G13998
TU20650 other upstream 142585 21164297 ~ 21164822 (+) False G13998
TU20478 other upstream 803184 20493442 ~ 20504223 (+) False LOC122326305
TU20479 other upstream 822189 20481664 ~ 20485218 (+) True G13882
XR_006247459.1 other upstream 834791 20467268 ~ 20472616 (+) False gbp2
TU21079 other downstream 119968 21481676 ~ 21482318 (+) False LOC122354659
TU21151 other downstream 353647 21715355 ~ 21716287 (+) False ccl20a.3
TU21370 other downstream 499183 21860891 ~ 21861442 (+) True G14471
unassigned_transcript_253 other downstream 567039 21928747 ~ 21928819 (+) True trnam-cau_1
TU21525 other downstream 1329543 22691251 ~ 22695330 (+) True fcer1gl

Expression Profile