RNA id: XM_043259985.1


Basic Information

Item Value
RNA id XM_043259985.1
length 838
RNA type mRNA
GC content 0.44
exon number 5
gene id fcer1gl
representative False

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 22691199 ~ 22695330 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tttcggaCAGTTTGTCTCAGCCCACAGTTTCCTGTTAAATGACTCTGTCACTGCCATGGTTTACTCTTCCTCTTCACTTCTCTGCTCAACTCATTTCAGAGGAAAGATGCAGTCGCTGGACGTCTGTCTGATTCTCCTGCTCAACGCCGGACGAGTCGCTGCGCAGCAGGGTGGAGACGTGTGTTACGTTCTGGACGGGATTCTGATTGTTTACGGCATTGTGTTGACCGTCCTTTACTGCAGATTAAAGATGCGTTCTTCTGGAGCGAAAGAGAAGCAGGACGGAGAGATTTATCAGGATCTGGGACGGCGGGACGCAGACACCTACGACACCATCGACACCCACCATCTTGGGAAGAAGAAGCCGCTGGCCTAAAAGAGACCCCCGAACCGCAGATCATTGGGCGTTCATGCCCTAAAAACTGTATTCGTGAGCCTGGAGCATGAAAGCAGTCATAAGCAGCTTGGGTATATCTGTAGTCATTCACAAAAACACGCTATATGGctcaaaatgatctttttttgcaccctcagattcaagattttcaaatagtcgTCTCTCAGCTGAATACATCAAtgtaaagattatttattcagattttaaatgatgtatGAATCTCAGTTTTGGTTTAAAATTGGACCCTTATCACTGGTCTTGTGCTCCATGGCCACGTTTTTGCGTTGTTTATAAGAAAGCGAACCGGCTTGGTTGAGTATGAGAGTCTGCTTTATTGTTGTTGTCTGCATGCGTCTTTGAGACGAGCGTCActtttaatgtgtaaaatacatgtataaGGCGATTtatttcaacataataaaataatatttttaacttgGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU21520 lncRNA upstream 20405 22633529 ~ 22670794 (+) False LOC122327931
TU21518 lncRNA upstream 20405 22643403 ~ 22670794 (+) False LOC122327931
TU21485 lncRNA upstream 40356 22643795 ~ 22650843 (+) True G14549
TU21473 lncRNA upstream 104949 22574923 ~ 22586250 (+) False G14541
TU21475 lncRNA upstream 112976 22577023 ~ 22578223 (+) True G14542
TU21543 lncRNA downstream 47211 22742427 ~ 22786013 (+) True G14578
TU21492 lncRNA downstream 81024 22776240 ~ 22777003 (+) True G14553
XR_006252487.1 lncRNA downstream 91505 22786721 ~ 22802473 (+) True LOC122357472
TU21556 lncRNA downstream 118050 22813266 ~ 22829545 (+) True LOC122328317
XR_006247781.1 lncRNA downstream 118199 22813415 ~ 22829492 (+) False LOC122328317
XM_043223611.1 mRNA upstream 2883 22672101 ~ 22688316 (+) True ncstn
XM_043223631.1 mRNA upstream 16924 22667312 ~ 22674275 (+) False LOC122327931
XM_043223641.1 mRNA upstream 16927 22667312 ~ 22674272 (+) False LOC122327931
XM_043223624.1 mRNA upstream 21683 22667312 ~ 22669516 (+) True LOC122327931
XM_043223672.1 mRNA upstream 25287 22659064 ~ 22665912 (+) True pnp5b
XM_043259982.1 mRNA downstream 865 22696081 ~ 22717815 (+) True nectin4b
XM_043216708.1 mRNA downstream 35458 22730674 ~ 22751530 (+) False si:dkeyp-68b7.12
XM_043216715.1 mRNA downstream 35708 22730924 ~ 22751530 (+) True si:dkeyp-68b7.12
XM_043216725.1 mRNA downstream 36308 22731524 ~ 22751530 (+) False si:dkeyp-68b7.12
XM_043224502.1 mRNA downstream 57537 22752753 ~ 22757673 (+) True si:dkeyp-68b7.5
unassigned_transcript_253 other upstream 762380 21928747 ~ 21928819 (+) True trnam-cau_1
TU21370 other upstream 829757 21860891 ~ 21861442 (+) True G14471
TU21151 other upstream 974912 21715355 ~ 21716287 (+) False ccl20a.3
TU21079 other upstream 1208881 21481676 ~ 21482318 (+) False LOC122354659
TU21008 other upstream 1329491 21337682 ~ 21361708 (+) False G14211
TU21973 other downstream 849890 23545106 ~ 23547974 (+) True G14831
unassigned_transcript_256 other downstream 1041835 23737051 ~ 23737122 (+) True trnaw-cca_1
XR_006247041.1 other downstream 1240705 23935921 ~ 23938943 (+) True LOC122323670
TU22269 other downstream 1388622 24083838 ~ 24088441 (+) False LOC122327442
TU22338 other downstream 1798222 24493438 ~ 24499685 (+) True G15065

Expression Profile