RNA id: TU22269



Basic Information


Item Value
RNA id TU22269
length 376
RNA type TUCP
GC content 0.50
exon number 3
gene id LOC122327442
representative False

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 24083838 ~ 24096897 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggtgagtccgtgtgaggagtgcggcggtgagtccgggggtggtgtagcggtgaatccgCAGTGAGGATCTGTGTGAGCAGTCATGGACGGGGGTCTGTTTGTGCTGCTTCTGCTGTCAGGGCTCTTCTGGAGCAGTTCTGCTCTTTCTCGTCCGTActtctatataaatacaccaATGTCGTGGCCAGATGCTCAGAGATACTGCAGAGAGAGATTCACTGATCTGGCTACTGTAGACAACATGGATGACGTGAACAGGCTGGTAAATATAATAGATGCTGGATACAGTGGATCAGTGTGGATTGGACTGATGAAGGGGACACAGAAACAGTGGAGTTGGTCTAATGGAGAAAACACAACTTCTCAGTACTATAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU22264 lncRNA upstream 21645 24061884 ~ 24062193 (+) False LOC122327425
TU22263 lncRNA upstream 35496 24047800 ~ 24048342 (+) False LOC122327416
TU22243 lncRNA upstream 60230 24009525 ~ 24023608 (+) True G14996
XR_006247802.1 lncRNA upstream 88717 23994510 ~ 23995121 (+) True LOC122328489
XR_006247803.1 lncRNA upstream 89327 23993475 ~ 23994511 (+) True LOC122328496
TU22285 lncRNA downstream 52799 24141240 ~ 24141921 (+) True G15026
TU22291 lncRNA downstream 57693 24146134 ~ 24147389 (+) True G15029
TU22305 lncRNA downstream 86844 24175285 ~ 24211058 (+) True G15039
TU22308 lncRNA downstream 98183 24186624 ~ 24250684 (+) True G15041
TU22317 lncRNA downstream 132545 24220986 ~ 24231256 (+) False LOC122325249
XM_043219721.1 mRNA upstream 2334 24079156 ~ 24081504 (+) True LOC122324938
XM_043222800.1 mRNA upstream 10634 24071209 ~ 24073204 (+) True LOC122327432
XM_043222786.1 mRNA upstream 21636 24059412 ~ 24062202 (+) True LOC122327425
XM_043222775.1 mRNA upstream 35373 24045685 ~ 24048465 (+) True LOC122327416
XM_043218841.1 mRNA upstream 51635 24029004 ~ 24032203 (+) True LOC122324443
XM_043220920.1 mRNA downstream 21222 24109663 ~ 24111683 (+) True LOC122326195
XM_043222826.1 mRNA downstream 24336 24112777 ~ 24115107 (+) True LOC122327448
XM_043222839.1 mRNA downstream 28301 24116742 ~ 24117634 (+) True LOC122327453
XM_043257880.1 mRNA downstream 153431 24241872 ~ 24249991 (+) True abhd17aa
XM_043220538.1 mRNA downstream 460854 24549295 ~ 24551538 (+) True LOC122325496
XR_006247041.1 other upstream 144895 23935921 ~ 23938943 (+) True LOC122323670
unassigned_transcript_256 other upstream 346716 23737051 ~ 23737122 (+) True trnaw-cca_1
TU21973 other upstream 535864 23545106 ~ 23547974 (+) True G14831
TU21525 other upstream 1388508 22691251 ~ 22695330 (+) True fcer1gl
unassigned_transcript_253 other upstream 2155019 21928747 ~ 21928819 (+) True trnam-cau_1
TU22338 other downstream 404997 24493438 ~ 24499685 (+) True G15065
unassigned_transcript_258 other downstream 952988 25041429 ~ 25041511 (+) True trnal-uaa
unassigned_transcript_259 other downstream 953542 25041983 ~ 25042065 (+) True trnal-uaa_1
unassigned_transcript_260 other downstream 954096 25042537 ~ 25042619 (+) True trnal-uaa_2
unassigned_transcript_261 other downstream 954749 25043190 ~ 25043271 (+) True trnal-uaa_3

Expression Profile