Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU22586 |
| length | 1114 |
| lncRNA type | inter_gene |
| GC content | 0.23 |
| exon number | 2 |
| gene id | G15226 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056700.1 |
| NCBI id | CM032069.1 |
| chromosome length | 25613461 |
| location | 25199691 ~ 25206930 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0005768 | endosome | cellular_component |
| GO:0005770 | late endosome | cellular_component |
| GO:0044433 | obsolete cytoplasmic vesicle part | cellular_component |
| GO:0044440 | obsolete endosomal part | cellular_component |
| GO:0098588 | bounding membrane of organelle | cellular_component |
| GO:0031902 | late endosome membrane | cellular_component |
| GO:0097708 | intracellular vesicle | cellular_component |
| GO:0031410 | cytoplasmic vesicle | cellular_component |
| GO:0010008 | endosome membrane | cellular_component |
| GO:0031982 | vesicle | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU22584 | lncRNA | upstream | 29951 | 25105703 ~ 25169740 (+) | False | G15225 |
| TU22593 | lncRNA | upstream | 42456 | 25149255 ~ 25157235 (+) | True | G15233 |
| TU22605 | lncRNA | upstream | 54685 | 25123300 ~ 25145006 (+) | True | G15240 |
| TU22600 | lncRNA | upstream | 84553 | 25111261 ~ 25115138 (+) | True | G15236 |
| TU22492 | lncRNA | upstream | 358698 | 24788885 ~ 24840993 (+) | True | G15165 |
| TU22818 | lncRNA | downstream | 258520 | 25465450 ~ 25595289 (+) | True | G15392 |
| XM_043264704.1 | mRNA | upstream | 88915 | 25089791 ~ 25110776 (+) | True | lrrc24 |
| XM_043265100.1 | mRNA | upstream | 137181 | 25051285 ~ 25062510 (+) | False | eef1da |
| XM_043222921.1 | mRNA | downstream | 9558 | 25216488 ~ 25219623 (+) | True | crygn1 |
| XM_043264772.1 | mRNA | downstream | 15214 | 25222144 ~ 25236609 (+) | True | LOC122362952 |
| XM_043264908.1 | mRNA | downstream | 93270 | 25300200 ~ 25304723 (+) | True | LOC122363040 |
| XM_043222945.1 | mRNA | downstream | 187226 | 25394156 ~ 25406903 (+) | True | LOC122327519 |
| XM_043216497.1 | mRNA | downstream | 208589 | 25415519 ~ 25419928 (+) | True | LOC122322894 |
| TU22577 | other | upstream | 24403 | 25170736 ~ 25175288 (+) | True | G15224 |
| unassigned_transcript_272 | other | upstream | 149052 | 25050557 ~ 25050639 (+) | True | trnal-uaa_14 |
| unassigned_transcript_271 | other | upstream | 150005 | 25049604 ~ 25049686 (+) | True | trnal-uaa_13 |
| unassigned_transcript_270 | other | upstream | 150559 | 25049050 ~ 25049132 (+) | True | trnal-uaa_12 |
| unassigned_transcript_269 | other | upstream | 151212 | 25048397 ~ 25048479 (+) | True | trnal-uaa_11 |
| XR_006253181.1 | other | downstream | 15214 | 25222144 ~ 25236609 (+) | False | LOC122362952 |
| TU22800 | other | downstream | 187401 | 25394331 ~ 25397882 (+) | False | LOC122327519 |
| TU22814 | other | downstream | 285330 | 25492260 ~ 25502158 (+) | False | LOC122362387 |
| TU22813 | other | downstream | 289133 | 25496063 ~ 25502158 (+) | False | LOC122362387 |
| TU22853 | other | downstream | 392531 | 25599461 ~ 25599926 (+) | True | G15410 |
