RNA id: TU22593



Basic Information


Item Value
RNA id TU22593
length 281
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G15233
representative True

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 25149255 ~ 25157235 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GACTGAATGTCGAGATTAAACTCGTATATTATATTTGCCAGTGGTGGTTCTCCATTCTCCACAATACAGTAATACTTTCcagtgtgtttgttctgcaggTTTCTCATCGTCACAGTGAAGAGTCTCTGATCAGGATGATCAATTACTGACAGATTCTCctctgttgtgtttgtgtatgttttagaTCTATCAATCTCTGAGTACCAGTATTTCTTCATCTGTGAGTATTTCTCATCATAATGACATGGGATGGTGACAGATCCTCCGGTCTGAACAGTTAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU22605 lncRNA upstream 4249 25123300 ~ 25145006 (+) True G15240
TU22600 lncRNA upstream 34117 25111261 ~ 25115138 (+) True G15236
TU22492 lncRNA upstream 308262 24788885 ~ 24840993 (+) True G15165
TU22524 lncRNA upstream 332825 24813299 ~ 24816430 (+) True G15189
TU22497 lncRNA upstream 351691 24796813 ~ 24797564 (+) True G15169
TU22618 lncRNA downstream 32785 25190020 ~ 25330287 (+) True G15250
TU22586 lncRNA downstream 42456 25199691 ~ 25206930 (+) True G15226
TU22818 lncRNA downstream 308215 25465450 ~ 25595289 (+) True G15392
XM_043264704.1 mRNA upstream 38479 25089791 ~ 25110776 (+) True lrrc24
XM_043265100.1 mRNA upstream 86745 25051285 ~ 25062510 (+) False eef1da
XM_043222921.1 mRNA downstream 59253 25216488 ~ 25219623 (+) True crygn1
XM_043264772.1 mRNA downstream 64909 25222144 ~ 25236609 (+) True LOC122362952
XM_043264908.1 mRNA downstream 142965 25300200 ~ 25304723 (+) True LOC122363040
XM_043222945.1 mRNA downstream 236921 25394156 ~ 25406903 (+) True LOC122327519
XM_043216497.1 mRNA downstream 258284 25415519 ~ 25419928 (+) True LOC122322894
unassigned_transcript_272 other upstream 98616 25050557 ~ 25050639 (+) True trnal-uaa_14
unassigned_transcript_271 other upstream 99569 25049604 ~ 25049686 (+) True trnal-uaa_13
unassigned_transcript_270 other upstream 100123 25049050 ~ 25049132 (+) True trnal-uaa_12
unassigned_transcript_269 other upstream 100776 25048397 ~ 25048479 (+) True trnal-uaa_11
unassigned_transcript_268 other upstream 101333 25047840 ~ 25047922 (+) True trnal-uaa_10
TU22577 other downstream 13501 25170736 ~ 25175288 (+) True G15224
XR_006253181.1 other downstream 64909 25222144 ~ 25236609 (+) False LOC122362952
TU22800 other downstream 237096 25394331 ~ 25397882 (+) False LOC122327519
TU22814 other downstream 335025 25492260 ~ 25502158 (+) False LOC122362387
TU22813 other downstream 338828 25496063 ~ 25502158 (+) False LOC122362387

Expression Profile