RNA id: TU22618



Basic Information


Item Value
RNA id TU22618
length 359
lncRNA type read_through
GC content 0.37
exon number 2
gene id G15250
representative True

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 25190020 ~ 25330287 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCTCAGCTCTGTGTCTCCGGTGGGAGTCAGAGGAGTCGCGGGTCCTTCGTTCTCTCCGTCCCCGGGAGCCACAACGTCCTCTTCGCCGTTCACGTCGTACGAGCTGTTCTGTCTCCGGAAACAACACGGACAAGCTCTCCGAAACCAGCGGCGACAACCGCTCTCTTCTTTCTTGGTTTTGGACTCGGTGTGTCTCTCTGGGACGGCCTGGCCGTTACTGTCAGAAACGCCATGGAAACGGCCGACGGTGGCATTATCTCGGATTGAATGTCTTTCTGCTGGCATCTTTTTTACACAGGCTTTCTCCGCAGATATATAATGTTCTCCGGGTTTATGTATGCCGTTCGAGGCTGCCACGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU22584 lncRNA upstream 20280 25105703 ~ 25169740 (+) False G15225
TU22593 lncRNA upstream 32785 25149255 ~ 25157235 (+) True G15233
TU22605 lncRNA upstream 45014 25123300 ~ 25145006 (+) True G15240
TU22600 lncRNA upstream 74882 25111261 ~ 25115138 (+) True G15236
TU22492 lncRNA upstream 349027 24788885 ~ 24840993 (+) True G15165
TU22818 lncRNA downstream 135163 25465450 ~ 25595289 (+) True G15392
XM_043264704.1 mRNA upstream 79244 25089791 ~ 25110776 (+) True lrrc24
XM_043265100.1 mRNA upstream 127510 25051285 ~ 25062510 (+) False eef1da
XM_043222945.1 mRNA downstream 63869 25394156 ~ 25406903 (+) True LOC122327519
XM_043216497.1 mRNA downstream 85232 25415519 ~ 25419928 (+) True LOC122322894
XM_043263859.1 mRNA downstream 161973 25492260 ~ 25516180 (+) True LOC122362387
XM_043258956.1 mRNA downstream 240854 25571141 ~ 25574135 (+) True LOC122358952
XM_043258919.1 mRNA downstream 250513 25580800 ~ 25591012 (+) True LOC122358930
TU22577 other upstream 14732 25170736 ~ 25175288 (+) True G15224
unassigned_transcript_272 other upstream 139381 25050557 ~ 25050639 (+) True trnal-uaa_14
unassigned_transcript_271 other upstream 140334 25049604 ~ 25049686 (+) True trnal-uaa_13
unassigned_transcript_270 other upstream 140888 25049050 ~ 25049132 (+) True trnal-uaa_12
unassigned_transcript_269 other upstream 141541 25048397 ~ 25048479 (+) True trnal-uaa_11
TU22800 other downstream 64044 25394331 ~ 25397882 (+) False LOC122327519
TU22814 other downstream 161973 25492260 ~ 25502158 (+) False LOC122362387
TU22813 other downstream 165776 25496063 ~ 25502158 (+) False LOC122362387
TU22853 other downstream 269174 25599461 ~ 25599926 (+) True G15410

Expression Profile