RNA id: TU22813


Basic Information

Item Value
RNA id TU22813
length 1032
RNA type TUCP
GC content 0.33
exon number 7
gene id LOC122362387
representative False

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 25492260 ~ 25516180 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCAGCGTCCGTTGGCGGTGACAGGGCTCGAGTGTAACCAGACGATGGCATTTTCCAAACCAATGTGGCAATGTGTCACTTGTGAGAAAATAACGCGATGATGGCATCGCGCCGCCGTACTTAAGGCGCTTTCTGTCTACTCCCCCGTAACGTTACCGGGCGCGATGGAGTCTGTGTCGACATGGAGTTCGCCTGGGAATTGCGTTAGACTTCGGTGCTTTTACTCGTCGCAATGCTGCGGTGTATCTTCGATGAGGATTTGCTAACCGCGGGACGACGAAGACGAGCACACCGACATCATGTCTGATCGGAATTACTGGACGGTGTGTCCGAGTTATAAAAGTCAGTTCGTTTCCGGAGGTTTAGTCAAACGGCCCAAAAGTAACCGGAACAAGAGGAAGAGTTTGGCTCCCTCACCTACTCTATCAAGACCGCTCTCACCCCTTCCTTTGCAAACTGGCAGCAGTCCTCTGGACAGTCCCAGAAATGTCTCCGGCAGTCCTTCGGTCAATTTTCCATTCATACGGAGACCAGACACACGAAGGTGGTCCGTGGCATCTGTCTCCTCTGGATATGGAACCAATCCACCCAGTTCTGCTGTTTCAtcttcctcctcctcacaGGAGCTCCTGCACCAGCTGCCCTCCCAGCCCACCCCAGATGACCTCCATCGCCTCTTCAAGCATTTCAGGAGCTCAGAGAGTGTGGCAGATGAGGATGGACAGCCCTCGCCTTTCCGTCCTCGCTCGAGGAGCCTTAGccCTGGGAGGACATGTGGCTCTTTTGATAACGAGATTGTGATGATGAATCACGTCTACAAAGAACGGTTTCCAAAGGCTACGGCTCAGATGGAGGGGCGTTTGCTGGCAGTGATTGCAGACTACTCCCCAGACAGAGCTCCTCCTCTTGCCGATGGAGTGCTGGGCTTCATTCAACACCAGCTGGTCGAGCTCGTCCGAGACTGTCTGGAGAAGTCCAGAAAGGGGCTCATCACATCCTGCTACTTTGTGGAACTTCAGGAAAAATTAGACAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU22618 lncRNA upstream 165776 25190020 ~ 25330287 (+) True G15250
TU22586 lncRNA upstream 289133 25199691 ~ 25206930 (+) True G15226
TU22584 lncRNA upstream 326323 25105703 ~ 25169740 (+) False G15225
XM_043216497.1 mRNA upstream 76135 25415519 ~ 25419928 (+) True LOC122322894
XM_043222945.1 mRNA upstream 89160 25394156 ~ 25406903 (+) True LOC122327519
XM_043264908.1 mRNA upstream 191340 25300200 ~ 25304723 (+) True LOC122363040
XM_043264772.1 mRNA upstream 259454 25222144 ~ 25236609 (+) True LOC122362952
XM_043222921.1 mRNA upstream 276440 25216488 ~ 25219623 (+) True crygn1
XM_043258956.1 mRNA downstream 68983 25571141 ~ 25574135 (+) True LOC122358952
XM_043258919.1 mRNA downstream 78642 25580800 ~ 25591012 (+) True LOC122358930
XM_043258928.1 mRNA downstream 78642 25580800 ~ 25591012 (+) False LOC122358930
XM_043258935.1 mRNA downstream 78644 25580802 ~ 25591012 (+) False LOC122358930
XM_043258943.1 mRNA downstream 78645 25580803 ~ 25591012 (+) False LOC122358930
TU22800 other upstream 98181 25394331 ~ 25397882 (+) False LOC122327519
XR_006253181.1 other upstream 259454 25222144 ~ 25236609 (+) False LOC122362952
TU22577 other upstream 320775 25170736 ~ 25175288 (+) True G15224
unassigned_transcript_272 other upstream 445424 25050557 ~ 25050639 (+) True trnal-uaa_14
unassigned_transcript_271 other upstream 446377 25049604 ~ 25049686 (+) True trnal-uaa_13
TU22853 other downstream 97303 25599461 ~ 25599926 (+) True G15410

Expression Profile