RNA id: XM_043263859.1


Basic Information

Item Value
RNA id XM_043263859.1
length 5846
RNA type mRNA
GC content 0.47
exon number 31
gene id LOC122362387
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 25492260 ~ 25516180 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGATGCGCTGGGTGACCAGGAAACAGGGTTAGAGATCTCGTGAGTGAAAGACATTCATCCCTACAGTATGGGTTAAATTAACCATAGAAATATATTCGCAATGGATGAGCCAAATATACTGAGGCGGCGTGGTCTACAGAAGGAACTGAGCCTTCCACGCAGAGGAAACATTAACCGGAACAAGAGGAAGAGTTTGGCTCCCTCACCTACTCTATCAAGACCGCTCTCACCCCTTCCTTTGCAAACTGGCAGCAGTCCTCTGGACAGTCCCAGAAATGTCTCCGGCAGTCCTTCGGTCAATTTTCCATTCATACGGAGACCAGACACACGAAGGTGGTCCGTGGCATCTGTCTCCTCTGGATATGGAACCAATCCACCCAGTTCTGCTGTTTCAtcttcctcctcctcacaGGAGCTCCTGCACCAGCTGCCCTCCCAGCCCACCCCAGATGACCTCCATCGCCTCTTCAAGCATTTCAGGAGCTCAGAGAGTGTGGCAGATGAGGATGGACAGCCCTCGCCTTTCCGTCCTCGCTCGAGGAGCCTTAGccCTGGGAGGACATGTGGCTCTTTTGATAACGAGATTGTGATGATGAATCACGTCTACAAAGAACGGTTTCCAAAGGCTACGGCTCAGATGGAGGGGCGTTTGCTGGCAGTGATTGCAGACTACTCCCCAGACAGAGCTCCTCCTCTTGCCGATGGAGTGCTGGGCTTCATTCAACACCAGCTGGTCGAGCTCGTCCGAGACTGTCTGGAGAAGTCCAGAAAGGGGCTCATCACATCCTGCTACTTTGTGGAACTTCAGGAAAAATTAGACAATTTCCTGCACGAGgcatATGAGCGCTCTGGCGAGGAAGTGACTGTGATTGCCAAACTCGTGAAGAAGATTCTCATCATTATTTCCAGACCAGCAAGACTACTGGAGTGTCTGGAGTTTGACCCTGAGGAGTTTTATCAGCGTCTCGAAGTTGCAGAAGACCAAGCAAAAATAGGCCAGGGCATCAAGACTGATATCCCCGATATATCATCAGTCAACTGGGTCTCACCGAGACCCCTGGAGgaCATGGTGCAGCTTGAGCACAACAACTCAGGCAGCCCAAGCAGAGATCTGGATGACACTGCAGAGAATCGTCAGGGAACCACAACGCCTCGAAGAAAACCTCTGGAAAGAGACTTTGAGACTATAAAGCTCATCAGCAATGGGGCTTATGGGGCTGTGTACCTGGTAAGGCATCGCGGGACACGGCAGCGCTTTGCCATGAAGAAGATCAACCGGCAGAACTTGATCCTGAGGAACCAGATCCAGCAGGTGTTTGTGGAGCGAGACATCCTGACGTTTGCAGAGAACCCTTTTGTTGTCAGCATGTTCTGCTCCTTTGAGACACGAAGGCACCTCTGCATGGTCATGGAGTATGTGGAGGGTGGAGACTGTGCAAATTTGCTGAAGAATATGGGTCCCTTGCCGGTGGACATGGCCAGAATGTACTTTGCAGAGACTGTTCTGGCACTAGAGTATCTTCATAATTATGGTATCGTGCACAGGGATCTCAAACCTGACAACTTGCTCATTACGTCGATGGGGCACATTAAACTCACTGACTTTGGTCTGTCTAAAATCGGTTTAATGAACATGACCACAAACCTGTATGAAGAACACATGGAGAAAGACACAAGAGAGTTCATTGATAAACAGgTTTGTGGCACGCCAGAGTACATCGCGCCAGAGGTCATCCTCAGGCAAGGTTATGGGAAACCTGTGGATTGGTGGGCCATGGGTATTATTCTTTATGAGTTCCTGGTGGGCTGTGTGCCTTTCTTTGGAGACACACCAGAAGAGCTCTTTGGCCAGGTGGTCAGTGATGAAATTGAGTGGCCAGAGGGTGATGATGCATTGCCTCTTGAGTCTCAAGACCTCATCACAAAACTGCTAAGACAGAGTCCCAAAGAGCGCTTGGGAGCTGGAGGGGCAGCAGAGGTCAAAcatcactttttctttcatgGTCTGGACTGGAGTGGACTGTTAAGACAGAAAGCGGAGTTCATTCCACAGCTTGAAACTGAAGACGACACAAGTTACTTTGACACACGTTCTGACCGTTACCATCACTCTGAGGAGGACGATGAGACCAACGATGATGAGTCTTATCAGGAGATCAAGTTTTCTTCCTGCTCGCATCGCTTCAGCAAGGTGTACAGTAGCACCGAGCAGCTGGCTTCTCCGTCCAACTTGAGCCTGTCCTCCTCTGAGCGGAGCTGCAGTGAGGAGAAGGAGGACCGGTGGGACGGTCATTCAATGCTGTCTCCAGTTGAAAACCCAAGACAGCTACCAAGCAGCGACAGGAAGCAGGATTCCCACAGGGGCAGTCCAAGTCCGAGGCCGAGAGCATCGTCCAGTTCCTCTCAGCCTGAGAGGGGCACTAGTCCCCTAATTTTGAACAGCACTCAGAGTCTTGAGGCCATGCCACACTTTGCCTTTCCTGAGGATGAGGaAGGTCTTGTGTCAAATCTCCGGCGAATTCGTCTGCGCAGCAACTCCACTGGAACAAGACCTACTAACCGCAGGGACCACAAGGGTCCGCGTCGCCTCGGGCTCCAGCAGGAGACCCCAGAGAAACCACGCTCACCATTTACATGCAAAGTCCCCAAGTCTGCATCCGTGTCTGGCCTTTCTCTCATCGTCACAGCAGATGACATCCCTGGTGGGCTCCAGACAAGCCCCATGTCTTCACACTCCCTCTCATCCAACCCTTCATCTCGGGATTCTTCCCCCAACCGAGACCTCTCTCTTAGCATGAACAGTCTTCGTCCTCCTGTGGTCATTCACAGCTCTGGGAGGAAGTACGGCTTTGCACTCCGTGCCATTCGGGTCTACATGGGCGACACTGATGTCTACACAGTGCACCACATGGTCTGGAGCGTTGAAGACGGCAGTCCTGCTCACGAGGCCGGGCTGAGGGCTGGTAACCTCATCACTCATGTGAATGGAGAGTGTATCCAGGGTCTGGTGCACACCGATGTGGTGGAGCTTTTGCTGAAGagtgGCAGTAAAGTGACTCTACAGACGACTCCTCTTGAGAATACGTCCATTAAAATTGGGCCTGCGAGAAAGACCAGCTCCAAGGGGAAAATGGCACGACGCAAAAAGAGCAAAAGGAAAGAGGGTCAAGACAGCAAACGGCGAAACCTTTTGAAGAAGCTGCCCAAACACAGTCCAGGGATTCAGAACAGTCGCAGTTTCTCGGCGGGTTTTCAGCACTCACCTAACGACAGCCTGTCGACTCCCGACGCGAGCCTGTCTCCTGGGCCCAACACGCCGTGCAGAAGCCCAGCTCCAGACCTGTCATGTGATTCAAACTCTCCTCAGAGTTCCTCCCCCTGCTCGAGCTCTCCGAATTCTCCCATCCCTCAAAGTCGACCAAGTTCCCTTCACGTTTTGGGATCCAAGATTGGTCTCCGTTACAGCAAGGGAGGCCGCTGCAAGTCCACCAACAGTATTCCCCCCTCCCCCCTCGCCTGCAATCCCTCCTCACAGCCTCTGTCTCCACAGTGTTCTCCATCGTCCCTCGCCGGAGCTCCTAAAAGCCTCCACTCGTTTCATAATAAGATGATGTCCCCTCCGACCATCGTGAGACAGACCGTGTGTCCCCGCAGCGCAGAATCACCTCGTTCGCCACTGCTGAGCAGGGTTCATTCATCCGAGAGGCCCTCCGGTGCTCAACATGGAGACAAAAAGGCCTTCTCCACTCGAAGACACACTGTGGAAGTTCCCCAGAGCGAAGCAGAGGGACTCGAGTCACAAACTAGTGACATTGCCTCAGGTTTTGTGTGTGTCGGCGACCACGCTAGACAAGGGTTGTACCTGGCTGGCCAACGGGCGAGGGACTCTGGCGGTGTGGTTATGAGGAAGCTAAACTTGTCTGAGAGACGAGATTCGTTTAAGAAGCAGGAAGCTGTTCAGGAGGTCAGCTTTGATGACTCTGATGACAAGGAGGTCACGACATCTACACCAGTGCCATCTCATCCGCTTTTCAAAGCTGCGTGGATCAGCACAATGCAGGCGGAGGGAAGCTCTGAGACTTCGGCGAGTAAACCCGACGAGCTTGGATCCAAGCTAAGAGAACAGAGGAAACCAGAGGATGGCTGTTAGCCTTAGATAAGTCCAGAAAACTGTGAGACGGGTGCTTCCATTATCATTCAAATCAGAATCGTAGAGAAAACAGGAGTAGGGAGTCTTAGTTTAGTATCATTTATTTGTAGGTTAGAAGTCATTGACCTGCCAAACTGTCttattaaaaggatagttttctaataaatgaaaattctgtcatttttttcccacctCATAAACCTGAATAACTTACTTTCTGCTGTAGAACATTCACGAAAAATGTCTGTTGTTTTTGAGCCCATTTAACTTTCATTGTGTAGACAAAAGCAGtcttaaatggatagttcacacTAAAATTCTCATTTACTAACTTCCATGCAGGTCcaaaagtctttttgtttttttttttttgtatgaaaatatcTTAAAGAATGCAGGTAATCAAATAGTTAATGGTCCTCATTGACTTTCAGACCATTTAtttccctactatggaagtcaaatGGAAACCAACAAGAAATGACGCTAAAATGTTAatcttttgggtgaactattcctttaaaacattgTTGGCATTGTTTGTGTTCCACCAAAGTAAATgatatgacagaattttcctttttgggcAGATTATCCcttttatgaatttgttttaCCAGATAGCACAATAAACTTTTGTAgattttgaaagattttatttattacatttgttttatacaaGATGGGAATGGAAAGGTCATACAGTAGGATCGCTTTCTGAGAATTTGCACACATGTGGTCCTGCTGAGGTTCAATTACTGTTGTCTCTTCATTCTCATATCTCATTTATATCAGTAATATTGGCATATAACGTCATGTAACGTCTGAGTTGTCAACAAAAAGTAGTTATTATGTTgactaatattatttttttgccattttgcaaACTTGGATGCAGTCTTGTGTTGGTTCGGTCATACCCAATAATATCCCAGCACCTAAACAACGACTTGTGAGAAGCCATTTGGCCAATGTTGGTATTGTAGAGTATCATGTTTACCGGAGCATTGTTGTTCTCGTTACTTAGAAAGAACAAAGTGGATTATGAATACTAATTTGgtcacaactttttatttatgttttggaaTTGGTATGTGTTATAGCAGTGTTGTACAACTGAAATCATTTGACGTACGTAATCTTTAACAAATGGTTGCTCTGTCTTTTAGTGTTTTGTAGTCGGACTTGTGGAAATGTCTGTTCTCTTGAATTCACTCAACAGCCATGTGGGATGTTTTTGTGAGTACCCTATATAAATGCCATAGTTCAAATCTGCACTGTAGCCTTCTGAAGTGTTGACATCTGCTTGTTTGGTTACACAAAAATTCAGTTACGAGTAACCTGAGCTTTCTATGTAATGGTTTGCTTAAACTGGACCGCTTCCTCATTCATTTATCAGAATTAAAGAGACAGAAGACGAAGTTTAGATACTTGCACTCCCAGTCTGACttgtctttctcttcttcttctgtacTTCAGATTTGTGTGGCACTGTTTCCTTATTCACATACAactttcatttacttttgtATGGTACTGTGGTGTTTTAAGTTGATTTTGTGTAGTTGATCCAGTTCTTTCCACAGCCGTGGACTCAGAAAGATCCTAGACTCTTAACTAAATCCACTCACTCACAGTGTATTTGTAAAGTTTATTTAACCATGATTAAATGTGTACATAATTGCTGATAATCATA

Function

GO: NA

KEGG:

id description
K08789 MAST; microtubule-associated serine/threonine kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU22618 lncRNA upstream 161973 25190020 ~ 25330287 (+) True G15250
TU22586 lncRNA upstream 285330 25199691 ~ 25206930 (+) True G15226
TU22584 lncRNA upstream 322520 25105703 ~ 25169740 (+) False G15225
XM_043216497.1 mRNA upstream 72332 25415519 ~ 25419928 (+) True LOC122322894
XM_043222945.1 mRNA upstream 85357 25394156 ~ 25406903 (+) True LOC122327519
XM_043264908.1 mRNA upstream 187537 25300200 ~ 25304723 (+) True LOC122363040
XM_043264772.1 mRNA upstream 255651 25222144 ~ 25236609 (+) True LOC122362952
XM_043222921.1 mRNA upstream 272637 25216488 ~ 25219623 (+) True crygn1
XM_043258956.1 mRNA downstream 54961 25571141 ~ 25574135 (+) True LOC122358952
XM_043258919.1 mRNA downstream 64620 25580800 ~ 25591012 (+) True LOC122358930
XM_043258928.1 mRNA downstream 64620 25580800 ~ 25591012 (+) False LOC122358930
XM_043258935.1 mRNA downstream 64622 25580802 ~ 25591012 (+) False LOC122358930
XM_043258943.1 mRNA downstream 64623 25580803 ~ 25591012 (+) False LOC122358930
TU22800 other upstream 94378 25394331 ~ 25397882 (+) False LOC122327519
XR_006253181.1 other upstream 255651 25222144 ~ 25236609 (+) False LOC122362952
TU22577 other upstream 316972 25170736 ~ 25175288 (+) True G15224
unassigned_transcript_272 other upstream 441621 25050557 ~ 25050639 (+) True trnal-uaa_14
unassigned_transcript_271 other upstream 442574 25049604 ~ 25049686 (+) True trnal-uaa_13
TU22853 other downstream 83281 25599461 ~ 25599926 (+) True G15410

Expression Profile