RNA id: XM_043217848.1


Basic Information

Item Value
RNA id XM_043217848.1
length 3026
RNA type mRNA
GC content 0.45
exon number 13
gene id ankhb
representative False

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 14918221 ~ 14932680 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCGCCACCTGTTGGACGACAAATAAGATGTCGATCCTTTTTCGCCGAGATTGATTAGAACCGCTTCAAAAAAATTCTAGCGTTAAAGTCTCGTTTCGATGTTTTGCTCGCGATGTCAACATTTCGTATCACACAAACGTGCGGGCTTACACGCAGGAGGGCAGGGACGGACCTGATCTCGGCGGATTTCTGCTAGAAAACGCTCAGAACTCGACGGGCTGTGACCGGCCCCGCATCCTTCCAGATCCGAGCAGCTGATGCTGGCGGTGCCGCCGCTCTCCTCCCTGCGATCATGGTGAAATTCCCGGCGCTGACGCACTACTGGCCTCTCATCCGATTCCTGGTGCCGCTGGCCATAACCAACATAGCCATCGACCTCGGCGAGCAGGCTCTGAACAGGGGCATTGCGACAGTTAAAGAGGATGCAGTAGAAATGCTGGCCAGCTATGGTCTGGCTTACTCCCTCATGAAGTTCTTCACTGGTCCTATGAGTGATTTCAAGAACGTAGGGCTGGTGTTTGTCAACAGCAAAAGGGACAGAACCAAGGCAGTCCTCTGTATGGTCGCTGCAGGAACCGTGGCTATCGTTTTCCACACTCTTATTGCCTACACAAATCTGGGCTATTACATCATTAACAAACTGCATCATGTGGATGAGTCTGTGGGGAGTAAGACCCGGAAGGCGTTTCTCTATCTGGCTGCTTTTCCTCTACTTGACGCCATGGCCTGGACTCATGCTGGGATCCTTCTGAAGCACAAGCACAGTTTCCTGGTGGGATGTGCGTCTATTTCTGATGTTGTTGCACAGatTGTGTTTGTTGCTATTTTGCTCCACAGTCACCTGGAGTGTGTGGAGCCCTTGTTGATCCCAATCCTCTCTCTGTATATGGGCGCCTTAGTACGCTTCACTATCGTTGGTTTGGGTTACTACAGGAACATTCATGACAACATCCCAGAATCCAGTGGGCCTGAGGTTGGGGGTGATGCCACTATTAAAAAGATGCTAAGCTTTTGGTGGCCACTGGCTCTCATCCTGGCTACACAGAGGATTAGCAGACCCATCGTCAATCTGTTTGTGTCACGGGATCTGAAAGGAAGCACAGCTGCCACAGAGGCTGTTGCAGTTCTCACAGCAACGTATCCAGTGGGTCATATGCCATATGGATGGCTCACTGAACTCAGAGCTGTTTACCCTGCTTTTGACAAgAATAACCCAAGCAACAAGCTGGTCAACAGTGGTACATTTGTGACAAAGTCCCACATCAAGCGCttcacttttgtttgtttggctcTTTCTATAACACTCTGTTTTGTGGTCTTCTGGGCACCGCACATTTCTGAGAGGATCCTGGTAGACATCATTGGAGTAGATCATGCTTTCGCCGAGCTGTGTGTCGCCCCATTGCGAATTTTCTCCTTCTTTCCCATTCCAGtGACGATTCGTGCTCACCTGACTGGTTGGCTCATGACCCTGAAGAAGACCTTTGTCTTGGCGCCCAGCTCTGTCCTCCGCATCATTGTCCTCATTACCAGTCTCATAGTGCTTCCTTACATGGGCGTACATGGAGCCACCCTCGGTGTTGGATCCCTGCTGGCTGGTTTCCTTGGGGAGTCTACAATGGTTGCAATCGCAGCATGCTATGTCTACCGGAAACAGaagaaaaagaaagactcCGATGAAGACATGGCCATCGACGGGGAGGACTCTGCCCCCATGAACGAGGTCAGAGCCGGGGGCCGCATGGACGACATCGTGGAGTTGAgagaagaggatgaggaagagctggaggaagacTGAGCAGTGGATTCAAGGCTGAGCAGGATGCGTTGTGGGAATCGGGGCCTTCTTGCTTACTCGGGCAGTGTTTTTATCGCTTGCTGTCCCCTGCTGCCGCCTTTCCCTCCTGCCGAGGCGAGAGACCAGCTCACCTTTTCAATGCACAcagttcaaataaacacagagggACATTTAGATATCAGTCGTCGAGACTACAGTCGTCTGCTGCAGCATATCTATGTTACAGTACACACGCTGACATACAAATGCGTACATGCGTCTTCCAGCTGTCGTCAGGAGATCGTATTTTCTGAGGCAGGACAGTGAAGATACTGATTTGTACCAAAGCAATGTTGTGCATtaactgctattttttttttctgtatgctGATCTTTAATGTGCTGCCGTCCTACAAGTTTTGACTCTTCAAAGGAAAGACTACACTAAATGCAGTTACATCATCCGCTTggaatgtattttctgtttcttcttcttcttcttcttcttctttttttacttctaaTATTTAACAGAAAGGACAGACTTGATAAGAATTTTGAGGTCCATAGGCGGTGATGTGTTACTGCAACATGCTTTTTTGGGGggctttcatcatttaaaaaaatgtcaacagaagatataaatatatatatatatatatatatattacagatttttattggAATTGAGAATGAATTTGATGGACATCTTAGAAAACAACAGTTTCAGAGTGACAAATGGTTGAAGTTTATGGGTCATCTAGAAgacctatttttttaaatatacataccATATGTTGTAGGTGtataaaatatgatacattttgtATGGGTGATGTTGTGAACTCTGTATATTGTAGGAAAAGAAAGAATTGGACCGTGTGTTTTCATAATTGCGTCTATTGAAGTATTTGTtttatcttaatttattttggGCATTCATTTTGTATCTCAGGATGTTTGTGATGGAaaacataaagtaaaaatatatataattacttataTAAAGTGATATAAGTAATATAAAGTCTGAATAATGTACCCTCCCTAATGAGCTGTTTTTCAAGTTTCACACACAGCTTCTAAGGATGTTTTAAGCcagtgtttgtttcatttagatTATAGTGAAGTCTGGCTGAGCTTGTTCTGTATTTGAGATTTCCTGGACAATGCCAAGTCATGatagaaacatttattacagtttcaGAAGTCTTCAGTCCTCTCATTAAACAGTGAAAATGTGGTTTAAA

Function

GO:

id name namespace
GO:0030500 regulation of bone mineralization biological_process
GO:0035435 phosphate ion transmembrane transport biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0015114 phosphate ion transmembrane transporter activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU17957 lncRNA upstream 32152 14857372 ~ 14886069 (+) True G12143
TU17961 lncRNA upstream 39449 14866198 ~ 14878772 (+) False G12144
TU17962 lncRNA upstream 48490 14866198 ~ 14869731 (+) True G12144
TU17945 lncRNA upstream 88735 14827051 ~ 14829486 (+) True G12136
TU17944 lncRNA upstream 91276 14823161 ~ 14826945 (+) True G12135
XR_006246966.1 lncRNA downstream 6509 14939189 ~ 14982818 (+) False LOC122323195
XR_006246965.1 lncRNA downstream 6510 14939190 ~ 14982818 (+) False LOC122323195
XR_006246964.1 lncRNA downstream 6512 14939192 ~ 14982818 (+) False LOC122323195
TU18060 lncRNA downstream 6573 14939253 ~ 14982702 (+) False LOC122323195
TU18061 lncRNA downstream 6573 14939253 ~ 14982702 (+) False LOC122323195
XM_043217860.1 mRNA upstream 2912 14910875 ~ 14915309 (+) False otulinb
XM_043217868.1 mRNA upstream 2912 14910901 ~ 14915309 (+) False otulinb
XM_043217883.1 mRNA upstream 2912 14910919 ~ 14915309 (+) False otulinb
XM_043217876.1 mRNA upstream 2912 14910984 ~ 14915309 (+) True otulinb
XM_043261298.1 mRNA upstream 54713 14855829 ~ 14863508 (+) True stard3nl
XM_043220464.1 mRNA downstream 3042 14935722 ~ 14937958 (+) True mycb
XM_043222099.1 mRNA downstream 282189 15214869 ~ 15222679 (+) True klhl18
XM_043217246.1 mRNA downstream 297326 15230006 ~ 15234855 (+) False zgc:136930
XM_043217249.1 mRNA downstream 297336 15230016 ~ 15235251 (+) True zgc:136930
XM_043217271.1 mRNA downstream 305801 15238481 ~ 15240694 (+) True ccr9a
XR_006252462.1 other upstream 135244 14776322 ~ 14782977 (+) False ackr4a
XR_006252465.1 other upstream 135517 14776322 ~ 14782704 (+) False ackr4a
TU17566 other upstream 738606 14175364 ~ 14179615 (+) True G11854
TU17573 other upstream 738606 14175364 ~ 14179615 (+) False G11854
TU17265 other upstream 2045076 12867983 ~ 12873145 (+) False rnf152
TU18526 other downstream 1334363 16267043 ~ 16268797 (+) True G12531
TU18915 other downstream 2099639 17032319 ~ 17037297 (+) False golim4b
XR_006252905.1 other downstream 2429565 17362245 ~ 17367861 (+) False sppl2
TU19352 other downstream 2634161 17566841 ~ 17567916 (+) True G13114
TU19349 other downstream 2674572 17607252 ~ 17608092 (+) True G13111

Expression Profile