RNA id: XM_043217860.1


Basic Information

Item Value
RNA id XM_043217860.1
length 1700
RNA type mRNA
GC content 0.45
exon number 9
gene id otulinb
representative False

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 14910875 ~ 14915309 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AATTCCCACAATCCTCTATTCACAGGAAGTATTGTATTCGTAGGCGTTTCGTTTTATAATCTTCATGTTTTGTAGTCCCCGTTCGGCAAGACAGTAAGAGCAGCCCGCCATGCAGAGATGCAGGTTGGACGTATCTGCACATGTGTTATGATTCAGGTACGAAGGATGTGCAAAATCACCAAACAAAGTCAAAACCATGAATAAAACGACAAAGTCTGCTTGTGACTCTGAACGACAGAGTAAAAAAGTCAAAACGAGTCATGGATCGACACACGGCACTCAAGGTCAGAAAGCAGATGTGAAGGGCCGGGCAGCTAAAAAAGATGCTTGTTCTTCTGGACCTGAGAGAAGCTCTGAGTCTTCCCACACTATGCAAAAACGTGCTCAGAAGGAGGCCAAACCTGCTCATAGTGACCGTCATTCACCCCAGCAGCATCTGATGAAGACGGCGTCTGCTGAAGATGAAAAGAGTGATGTGGACCTGTACAGAGGAGAAGAGGAAATCCAAAAAGAGCTGCAGGACAAGCAACAGTCAGAGTCAGCGGCTGTAAGTGAGTCCCAGAGCAGTGTGTCAGCTGCCGAGGATATTCAGACATACAGTGAGAAAGAATGGAAAGGCAACACCACAAAAAGTCTGCTTATTCGAAAGGGATATGAAGCAATAGCCAATGAGTTCAATCTGCGCAGAGTAAGAGGCGATAACTATTGTGCGCTAAGGGCAACACTCTTCCAGGTGCTCAGCCAATCAAAACAGCTTCCCGTCTGGTTACATGACGCCGACAAGTGGCCAAAACAAATTCAGTGTGATCAGGATTTCATTAAGGAGTGGCAGTTTCCATTTGAATCTAGCAAGAGCAGAGTACAGCATCTTGAGCAATGTCTGGAGCTACTGAAGAAAAGGTGGCAAGAGGCTGTCCAGTGTAAAAGTCTTGAGGAGAGGGAGCGTATGTGCCAGCAGGTGTTCAGAGGTCACGATGAGGAATATGAGCTTCTGGAAGCACTGAAGTTCTTGATGCTAAGGACTGCTATTCAGTTGCACTCAGACATGGAGAAGGGCTCTGATGTACCAGAGTTCTGTTGGCTTCTTTTCGCTCGTGACTCATCCAAATGCCCCAAGACATTCCTCACCAACCACCTCAGGCATGTAGGCTTCAGTGGTGGACTGGAACAGGTGGAGATGTGCCTCTTGGGCTATTCCATTCAGCAGATGTTGCGGGTTGTTCGGCTGTACaagtgtgacactgaagagtttATTACATACTACCCTAACAACCACAAGAAGGACTGGCCTCTTCTGTGCTTGCTTACAGAAGATGATAGACACTACAATCTACTCGTGCCCAAAAAGTGCTCCAAATTTGATGCACATGGTAGGCCAAGGTGGAATCCGCCTTCAGATGGACAATCAAGCATAACGACACGTCTTTAAAGAGTAAATGGCAATCACACACAATCTACTGAACTCAGGAGTTACAATCCTTCTTTTTGTCCACGTAGCTGGTCTTGagtttatgttttatgaatttaaagatTTGCTTATTCTGCTACCTATGTAATTGtatgcatttctaaataaattatgtgCAATAGTTTTATGAGTCATAGCTGAAGCTCCAGCTAGGATGTGAGgaaaattaaactgtaaaactgaaCTTGCTTTTCTAGCTTTTTAGGTATTAAATTGAGCTGATTTAGTGTGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU17957 lncRNA upstream 24806 14857372 ~ 14886069 (+) True G12143
TU17961 lncRNA upstream 32103 14866198 ~ 14878772 (+) False G12144
TU17962 lncRNA upstream 41144 14866198 ~ 14869731 (+) True G12144
TU17945 lncRNA upstream 81389 14827051 ~ 14829486 (+) True G12136
TU17944 lncRNA upstream 83930 14823161 ~ 14826945 (+) True G12135
XR_006246966.1 lncRNA downstream 23880 14939189 ~ 14982818 (+) False LOC122323195
XR_006246965.1 lncRNA downstream 23881 14939190 ~ 14982818 (+) False LOC122323195
XR_006246964.1 lncRNA downstream 23883 14939192 ~ 14982818 (+) False LOC122323195
TU18060 lncRNA downstream 23944 14939253 ~ 14982702 (+) False LOC122323195
TU18061 lncRNA downstream 23944 14939253 ~ 14982702 (+) False LOC122323195
XM_043261298.1 mRNA upstream 47367 14855829 ~ 14863508 (+) True stard3nl
XM_043261364.1 mRNA upstream 55704 14852700 ~ 14855171 (+) True epdr1
XM_043261352.1 mRNA upstream 61446 14838422 ~ 14849429 (+) True ranbp9
XM_043253296.1 mRNA upstream 73923 14836159 ~ 14836952 (+) True rnf182
XM_043256726.1 mRNA upstream 132040 14776322 ~ 14778835 (+) True ackr4a
XM_043217848.1 mRNA downstream 2912 14918221 ~ 14932680 (+) False ankhb
XM_043217840.1 mRNA downstream 3100 14918409 ~ 14932680 (+) True ankhb
XM_043220464.1 mRNA downstream 20413 14935722 ~ 14937958 (+) True mycb
XM_043222099.1 mRNA downstream 299560 15214869 ~ 15222679 (+) True klhl18
XM_043217246.1 mRNA downstream 314697 15230006 ~ 15234855 (+) False zgc:136930
XR_006252462.1 other upstream 127898 14776322 ~ 14782977 (+) False ackr4a
XR_006252465.1 other upstream 128171 14776322 ~ 14782704 (+) False ackr4a
TU17566 other upstream 731260 14175364 ~ 14179615 (+) True G11854
TU17573 other upstream 731260 14175364 ~ 14179615 (+) False G11854
TU17265 other upstream 2037730 12867983 ~ 12873145 (+) False rnf152
TU18526 other downstream 1351734 16267043 ~ 16268797 (+) True G12531
TU18915 other downstream 2117010 17032319 ~ 17037297 (+) False golim4b
XR_006252905.1 other downstream 2446936 17362245 ~ 17367861 (+) False sppl2
TU19352 other downstream 2651532 17566841 ~ 17567916 (+) True G13114
TU19349 other downstream 2691943 17607252 ~ 17608092 (+) True G13111

Expression Profile