RNA id: XM_043217968.1


Basic Information

Item Value
RNA id XM_043217968.1
length 1351
RNA type mRNA
GC content 0.42
exon number 9
gene id impa1
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 12376957 ~ 12380610 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACTGAAGTACATACTACGCATgcgcaacataaaaaaatcaaaacaaaaaaatcgcCTGTAGTTCCTAAACGGAACATTGAATTGTAAAGTATTTATTACTCATTTAAATAGGGGCAGTGGgatatttcattgttttctgaaaataacCAGACGTTTTAGGGTTAATCTCGTTTGGTCCTCCAAGAACCCGGAAACAACAATCTGACCGCTCGTCTTCATTTCGCCGGTCATTGAAAGAGGGTCCTTGCACAACGGCACGATGCCTGACCTTTGGCTGGATGCCATGGACCATGCTGTGACACTGGCCAGGAAAGCAGGAGAGATGGTAAGGGATGCTTTGCAGAATGACCTGAAGATCATGTGCAAAAGCTCTTCTGTCGACCTGGTCACTAAAACAGACCAGAATGTGGAGCAACTTATTATTACGTCAGTGAAGGAGAAGTTTCCTGAACACAGtttcattgggGAGGAGTCAGTGGCTGCAGGAGAACCTAGTGTTTTGACTGAAAAACCAACATGGATTGTTGACCCTGTGGATGGGACCACAAACTTTGTGCATGGATATCCATTTGTTGCTATATCCATTGGCTTCGCTGTCAACAAAACATTAGAGTTTGGGGTGGTTTATAGCTGCATAGAAGACAAGATGTACACGGCTCGAAAAGGGAAAGGTGCATTTTGCAACGGAGAGCCGCTGCAAGTGTCGGACCAAAAAGAGATTAACCAGTCAATCATCGCTACGGAGTTTGGCTCTAACAGAGACCCTGATGCCGTCGATAAGATTTTCTCTAGCATGAGGAAAATCCTATGCCTGCCAGTTCATGGGATACGTGGCGCTGGATCTGCTGCCATCAACATGTGCTTGGTAGCATCTGGTTGTGTCGAGGCCTATTATGAGATTGGGATCCACTGTTGGGATGTGGCGGCTGGGGCAGTCATAGTCTCAGAGGCAGGCGGAGTTCTCATGGATGTTGAAGGTGGCCCGATGGATCTGATGTCTAGAAGAGTCTTGGCAGCAAATAACAGCATAATTGGAGAAAGAATCGTTAAAGAGATTGAGGCTTTTTCAGCTGTTAGAGATGATGCACCTGTAAACCCTATCAAATAAACCCCTGTGCTATTAAAATCTGCTACATtagaaataatatatgaatattgaaTTTTCAGGTTATGTATGATATCTGTCTCATATATTATACCCATGTTTAAAGCTATGTGCAAATGGTAAATCAAGAAAAAGCATTGAGCTACTGAAAGGCAATGTTCATGgtcataaatgtgtttaaagcGTTTTACTagtaatattgtttgttttatacacAAGTTCAATAAACAAAGAGCTAATAATGAA

Function

GO:

id name namespace
GO:0046854 phosphatidylinositol phosphorylation biological_process

KEGG:

id description
K01092 E3.1.3.25, IMPA, suhB; myo-inositol-1(or 4)-monophosphatase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU17037 lncRNA upstream 37908 12337667 ~ 12339049 (+) True G11505
TU16942 lncRNA upstream 275831 12100875 ~ 12101126 (+) True G11419
TU16629 lncRNA upstream 758094 11614241 ~ 11618863 (+) True G11207
TU16626 lncRNA upstream 763391 11609251 ~ 11613566 (+) True LOC122328936
TU17175 lncRNA downstream 164743 12545353 ~ 12545592 (+) True G11590
TU17178 lncRNA downstream 233765 12614375 ~ 12614596 (+) True G11593
TU17180 lncRNA downstream 235385 12615995 ~ 12621414 (+) True G11595
XR_006252588.1 lncRNA downstream 243219 12623829 ~ 12624952 (+) False LOC122358236
TU17208 lncRNA downstream 316476 12697086 ~ 12697294 (+) True G11618
XM_043260495.1 mRNA upstream 221 12361720 ~ 12376736 (+) False asph
XM_043260486.1 mRNA upstream 221 12364627 ~ 12376736 (+) True asph
XM_043260504.1 mRNA upstream 221 12364627 ~ 12376736 (+) False asph
XM_043260516.1 mRNA upstream 5505 12369749 ~ 12371452 (+) True LOC122360148
XM_043220887.1 mRNA upstream 17895 12355888 ~ 12359062 (+) False ttpa
XM_043223600.1 mRNA downstream 107603 12488213 ~ 12541573 (+) True cdh7a
XM_043257989.1 mRNA downstream 249421 12630031 ~ 12650410 (+) True tesk2
XM_043258015.1 mRNA downstream 273268 12653878 ~ 12656884 (+) True si:ch73-382f3.1
XM_043218997.1 mRNA downstream 277436 12658046 ~ 12660442 (+) True selenop2
XM_043219017.1 mRNA downstream 280305 12660915 ~ 12664376 (+) True elovl8a
XR_006247863.1 other upstream 95453 12281372 ~ 12281504 (+) True LOC122328950
XR_006247873.1 other upstream 96298 12280590 ~ 12280659 (+) True LOC122328989
XR_006247874.1 other upstream 96943 12279911 ~ 12280014 (+) True LOC122328992
XR_006252734.1 other upstream 439367 11908073 ~ 11937590 (+) False pld1a
TU16617 other upstream 871227 11502402 ~ 11505730 (+) False mast3a
TU17183 other downstream 243213 12623823 ~ 12626387 (+) True LOC122358236
TU17265 other downstream 487373 12867983 ~ 12873145 (+) False rnf152
TU17266 other downstream 487373 12867983 ~ 12873085 (+) False rnf152
TU17566 other downstream 1794754 14175364 ~ 14179615 (+) True G11854
TU17573 other downstream 1794754 14175364 ~ 14179615 (+) False G11854

Expression Profile