RNA id: XM_043218268.1


Basic Information

Item Value
RNA id XM_043218268.1
length 5849
RNA type mRNA
GC content 0.47
exon number 8
gene id slc7a14a
representative False

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 12068261 ~ 12089926 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

attttatttaattttttacagtgataGGTGGTAATAAACATCACTCTTTGCATTTAACTTAGGGATGAGTTGCAGATTCCAcgacttaaatgtgtaaatgtcattattaaatgttacattttaaatgcatacctTACAAAAAAGAGGGGGTGGGGGGGATGTACTCGAGTAGATTTACAACATATACAACAGCTCCCTCGCTTTTCATCTTCCGGATTTtgcatttttccatttgatGCAGCGAGCGCGCTTCCTGTTTCCTTCCCAACGTGCTTCTGATGGCGGAACGATGACGGATCGTTAATTTTGCCCGTCGCAAAAGATGGCTCGATGTTCTCACGCAATGATATCATAACGTCGTTGACGTGGACGGCgacaataaattatgaatttgcTCGCTTATCACGTGGAAGCAGCGTCTGAATAATTTAACCCCTACGTTACTACACGAGCGCGCGTCCCTTTTTGCAGCACCGGTGAAGCATCCCTCCCTGCGACGACCTTAATCCCTACAATGATGATTTTTTCGCCTTCAGTGCTGCGGTAAGTTATGATAAATCACTGGTAGCGTTTATGATGAGAATTATACGGTAGGCAAACGGAAATGCCTCCTGCTTGTTATCCACCTGCCTTTGGACTACGCCACCGTGTCGCGCTGCCGTGAGCCGCAGCACCGCACATCAGCATCGGCACAGCTGGACAGCGGCAGCCTGGAAGCGTTGCTTCACCTTCGTGTGGAAGCATGTGGTAATGATGCTCCTCTGAAGGACACTGAACATCTCAGCTGCTTTCTGTGTGACCTCCCATTCTACGAGACCAAACCCCAAAGCTTCTTCAGATCTTCTCAAAGTATCAGCTCCATTTCTTGCAGCCCTTTGCCCCATAACCAGGCTACAAGATGAGCGGGCTCTTTGCCAAACTTGACCCGCGGCGAGTTCAATGGGGGGCCAACTGGTTTGCCTTCCAGTCTCGCGTCCTGCGCACGAAGCCGGTGGAGTCCATGCTTGAGAGCACGGGAGGCACTGGAGCTCACGGCACTAAACTTGCCCGCGTTCTCTCCACCGTGGACCTCGTGTCTTTGGGAGTGGGAAGCTGTGTGGGCACTGGCATGTATGTGGTGTCTGGACTGGTGGCTAAGGAAATGGCAGGGCCCGGGGTCATTGTGTCTTTCATCATCGCTGCTGTGGCCTCCATCCTGTCAGGGGTGTGCTACGCTGAATTTGGTGTGCGTGTGCCTAAAACCACAGGATCGGCCTACACTTACAGCTATGTGACAGTGGGAgaatttgtggcttttttcaTTGGCTGGAATCTGATTTTGGAGTACCTGATTGGTACAGCAGCAGGTGCCAGTGCACTCAGCAGTATGTTTGACTCGCTGGCCAATCACAGTATCAGCGGCTTCATGATCCAGCACATAGGAACGCTCAACGGCTTGGGTAAAGGAGAGCAGGCGTATCCGGACATCCTGGCCCTGGTCATAGTCATCCTGGTCACAGTAATAGTTGCCCTAGGCGTGAAGAATTCTGTCGGGTTCAACAACGTGCTGAATGTCATCAATCTGGTGGTGTGGGTGTTCATAATGATCGCAGGCCTGTTCTTCGTCAGTGGCAGCAACTGGGATGAGGGGCGGTTCCTGCCTTATGGCTGGTCAGGGGTCATGCAGGGTGCAGCCACTTGCTTTTATGCCTTTATTGGGTTTGACATCATAGCCACCACCGGAGAGGAAGCCAAGAGTCCCAACACATCCATCCCCTACGCCATCACTGCCTCTCTGGTCACCTGTCTCACTGCTTACGTCTCTGTGAGTGTGATCCTTACTCTGATGGTCCCCTACACTGACATTGACACGGATGCTCCACTGATGGAGATGTTTTCTTTACATGGCTTTCAAACTGCCAAATATATAGTGGCCATCGGCTCCATTGCAGGACTGACAGTCAGTCTGTTGGGCTCTCTCTTCCCATTGCCGAGAGTCATCTATGCCATGGCTGGAGATGGTTTGCTCTTCaggttCCTGGCCCATGTGAGCACATACACAGAGACTCCTGCAGTGGCCTGTGTGGTGTCTGGCTTCCTCTCTGCTCTCTTGGCCTTGCTCGTCAGTCTGAGGGACCTGATCGAGATGATGTCCATTGGCACTCTGCTAGCCTACACGCTGGTGTCAGTTTGTGTACTACTGCTGCGTTACCAGCCTGAAGGAGACATTCACGGATTCGTCAACTTCCTCTCTGAGCAGAACGCAAAGCGTAAAGAGGGAGTTTTGGCCGAGTGTGAGAAGGAAGCCTGTTCTCCGGTCAGCGAGGGTGAAGATTACGGAGGAGCTCCAACAAACACTTGCGGAGCCAAGAACTTGCCGTCTTTAGGAGACAATGAGATGCTGATCGGTAAACCTGACAAGTCCACCTACACCGCCAGTCACCCCAACTATGGCACAGTGGACATGTCCTCCGGCATTGAGTCAGACGAGACAGATAGCGTGTACCTGCTGAAGCTGAAGAAGCTGCTAGGGCCTCGCTATTACACCATGCGCATTCGACTCGGCCTGCCGGGCAAGATGGACCGGCCCACCATGGCCACTGGTCGTATCGTCACCCGCTGTGTCATTCTGctcttcatcctcatcttctGCTTCTGCTCCCTCATCATCTTCGGGTCGGGTCAGATCgctgatggtcagtggtgggcCGTGTTGCTGTTGGTGCTGCTGATGCTGGTCATCACGCTCCTGATCTTCATCATCATTCAGCAGCCGGAGAACCCCAAGCGCCTGCCCTACATGGCTCCCTGCGTTCCCTTCGTCCCGGCCTCGGCCATGCTGGTAAACGTTTACCTCATGCTCAAGCTCTCCACCATCACATGGATCCGTTTTGGTGTGTGGTGCTTTGTGGGTGTTTTGATCTACTTCGGCTACGGCATGTGGAACAGCACCCTGGAGATCACGGCACGCGAGGAGGAGGCCCACGCCAGCACATACCAGCGCTACGACATGGGTGTGGATGACAACTTCGCAGTGGATGACGATCTGTACCCTTCTGGAGAAGGAGGGCCGTACCAAAGCTGGGGCTCCCATGAGGGCAAAGGTGGGCACCAGAAACAGCAACGACAGCAGGAACAGAGCGAGCCTCAGTCTGATGGCCTGGACAGGGTGGACAACCACAGgacctcctcttcctcctcacaCAGCAGGGCCAAAAGCAAAGCCAGCAAACCCAGTCCGGGCTTTGAGGCGCTGGTGGTCGATGACGATTTGGACGATCCCTTGGAATGAGAATGTAATCCGAATGTACTCGCCTGCCAACAACTGCAGAACCCTTGGGCTAGGTTGTTAATACTCTGCAAtgagtttgtattttatttttattccttcaTTTGCAGCCCTTTTTCACTTCTAATAGATTAACGAGAATGCATAAAATGGGATTTAACTTTTAGAAGGCTTTTTTTGACCACACAGAACTTAAACAGCCCAAATAttccttcttttttaaaatcaattttaacaGTTTGATCCCTAATTCTCACTTAATCATGTTATCAAACTCTTCAGCACTTAAATATCTAATCTATTGTCTTTCACTTGAAAGTCCCCCTAACTCAAATTACAGTAACTAGCATGGAATTTATTACCCCGGTGCGTAGTTTATTACTGTCCTGTTAGTTATCACACTCCCACAGCCGTTCCCGATATTAGCGTCTTTCAGCTGTCAGGAGGATGTCCGTTCACAGGTCACTTCCTGTAGTCTATTAACCCCAGCATTAGGTGGGGTTGATATCAAACCAGAAAACATGTGAAGCCTCTAAAACACTTAAAGCGATTTGCACACTTTTGTTATTCAGTAAGCAGCTGTTTCAATACTGCATACAAAAAGTTTGTTTCGAGAAGCAAAGATAGAAGATAGCCATAATTGCTGACAAGTTATGAGTGACCCAGTTGAATCAAAGGCCTTGTTCTCTTCCGCTCTAACATCTAGCCCAAGTGAGGTTTGGACTGTAGGTTGTCACAAATAGTAATTGGACTTTGCTTGCAATAGTGCCTTCATCTGTCAGTGTGTGGTTTAAATTTGACCATCAAGATGTCCAtgcgtgtttgtttgtcatttctgtTGATGCTGTCATATCCATGGGTTTGTTTTCCTGGTGATGGTGCCTGTCAGCCGTCCTGTGTCACCATcgaccatccatccatccatcctatGTGGCAGTGACTCCACTTCATCCTTGCAAGCAGGCAGCTCTGTGTAAATACTGACGGTGTGACCACAGTACGATTTGTGTCTCTCGGCTGGTCAGTGTGtccgataaaaaaaaaaaaaggtgtaggAAAACAGAGGGAGTGAAATTTGCATGTGGTGGGGAGCGTGTTGTGAATTCTTTATCTGGCTGTGCTCTTCTGCTCTTCCCCCATAATTCACGTGGCGTTCGATTGATCTGTCCAGTCTAACTCTATCTGTGCTACAGCTCTGCCAGCCGaaataggcaaaaaaaaaaaaacaacaaaaacaaccaagCCAGGCCTCAAATCTATAAATTTGGAAGGCCACATGTGTTCAACATGCAGTGAGCACATCATACCATACTGCTTAAATGTATGTCCCTCAAATAtgttgaaatgataaaaaaccAAACATCGCGTTACCATAAATGATTTGCAAACTGGCTCTATAGAGTTTCATTTTGGGGCCTGGGTTGGTTTTGTTCCTTGCATCTGGTCTATGATGTGATTCTTTGTCTTTGCCGTGGCATTTTGCTGAATGTGTAGCATGTTCAGAACAAACGGGCCCGGAGTAAAACTATGTTTGTGAGTATTTGCATGTGTGGTGACCGTTGAAAGACTTGATGTAACTCTCAAATGTAGCATTCTGAGAGACGAGGGTAGCAGCCTGCCCACCGTACACCCCTCGAAACCCTCCTAACCCAAGTGGCCTCTGTTTACAAAGCAAGCCAAAGTCTGCAACCTTTGTTTACTGTATCCGACAAAAGACACCATTTTACTTCCGTAGAGTAGAACACCATATAACAGTGTGGAGATGTGCGATATCGAAgagaagtatttttttacaggCATTTCATACCTTCAGGTTCTCCGCTGGGTAGCGTAGCCACCGCCGGTGGTGTTTTGTGGGTTCAGAAGAACTTCTAAAGAAAAGTGGtgaaagcatatatttttaatgagctATTTCTAAAACCGTAACTGGAGACGTTTGGATTTTGATTTCatagttttgatttaaataaatattagcacATAAGAATAGACTTAAAGAGGGCAagtttttaaagggatagttcagcccAAAATGAATGTTCTGTCAGCATTTACTCACCTCAAATCAAAGATATTCGAAAATCTTTTTCTTGTCTGTACAACGGTATTCAATGATGCTGTTTTGAGTTCACCAGAAGTCAtgtttttgagtaaataatgacagaattttcataactttccctttaaataagattaaaaacctacgtacagaaatattttattaaaaatctgtctgtaaaaagaaaaaaatgtttccactATTGCTTTTAAAGTCAGCTACTATTTGTTATTTGTCTCTGAGAAAAGGTACAGTGTTTGTACTTCGTAAACTATCTTTCCTGCTATCATAGTTTGTTCGGTATTTGTTCAGGAAATGTGGAGATTGGCTTCCCTTGCAAATCTGATCTTTGTTTCTGCTGTATATTTTGGTATGAAGTGGATGTATTCTGGtttcaatgatttttttaaagaatctatTTATTGTTTCTTCTACTTGTGGTTTTGCTCTCCCGTTGCACTGTGTAATGAGATGTTAATATTGCTTCCATGCAACAATGAAAGTCATTTATTGCAGATCAGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU16629 lncRNA upstream 449398 11614241 ~ 11618863 (+) True G11207
TU16626 lncRNA upstream 454695 11609251 ~ 11613566 (+) True LOC122328936
XR_006247857.1 lncRNA upstream 457174 11610475 ~ 11611087 (+) False LOC122328936
TU16616 lncRNA upstream 566675 11500389 ~ 11501586 (+) False mast3a
TU16609 lncRNA upstream 611397 11456326 ~ 11456864 (+) True G11191
TU16942 lncRNA downstream 10949 12100875 ~ 12101126 (+) True G11419
TU17037 lncRNA downstream 247741 12337667 ~ 12339049 (+) True G11505
TU17175 lncRNA downstream 455427 12545353 ~ 12545592 (+) True G11590
TU17178 lncRNA downstream 524449 12614375 ~ 12614596 (+) True G11593
TU17180 lncRNA downstream 526069 12615995 ~ 12621414 (+) True G11595
XM_043217077.1 mRNA upstream 28786 12034994 ~ 12039475 (+) False eif5a2
XM_043217084.1 mRNA upstream 28786 12035252 ~ 12039475 (+) True eif5a2
XM_043219734.1 mRNA upstream 35179 12025276 ~ 12033082 (+) True slc2a2
XM_043262740.1 mRNA upstream 43363 11946162 ~ 12024898 (+) True tnika
XM_043260123.1 mRNA upstream 130671 11908073 ~ 11937590 (+) True pld1a
XM_043256052.1 mRNA downstream 22030 12111956 ~ 12150169 (+) True grin3ba
XM_043254130.1 mRNA downstream 66168 12156094 ~ 12168917 (+) True plppr3a
XM_043223854.1 mRNA downstream 86302 12176228 ~ 12189936 (+) True palm1b
XM_043223860.1 mRNA downstream 86303 12176229 ~ 12189936 (+) False palm1b
XM_043223867.1 mRNA downstream 92370 12182296 ~ 12189936 (+) False palm1b
XR_006252734.1 other upstream 130671 11908073 ~ 11937590 (+) False pld1a
TU16617 other upstream 562531 11502402 ~ 11505730 (+) False mast3a
TU16613 other upstream 568183 11496360 ~ 11500078 (+) False mast3a
TU16615 other upstream 569324 11496360 ~ 11498937 (+) False mast3a
TU16565 other upstream 727150 11339863 ~ 11341111 (+) False mrpl34
XR_006247874.1 other downstream 189985 12279911 ~ 12280014 (+) True LOC122328992
XR_006247873.1 other downstream 190664 12280590 ~ 12280659 (+) True LOC122328989
XR_006247863.1 other downstream 191446 12281372 ~ 12281504 (+) True LOC122328950
TU17183 other downstream 533897 12623823 ~ 12626387 (+) True LOC122358236
TU17265 other downstream 778057 12867983 ~ 12873145 (+) False rnf152

Expression Profile