RNA id: XM_043218822.1


Basic Information

Item Value
RNA id XM_043218822.1
length 2016
RNA type mRNA
GC content 0.45
exon number 7
gene id glula
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 8315131 ~ 8318467 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATCACACGCGCCGGGATCCTGTCACCACACGTATAAATCAGGCTGACAGCCCTAACTCCTGGTCAGAGGATGAGAGAACACCAAACACAAAACTATCTGTCAAACAACTGGACCTGCCAGTTCgatatcatacattttaatttctgttggTGTCCAGGggttttatagtaataaaaatggcCACGTCTGCCAGTGCTCAGTTGAGTAAAGTGGTAAAACGGCAGTATATGGAACTGCCTCAGGGAGACAAAGTACAAGCCATGTATATCTGGATAGACGGAACTGGAGAAGGACTGCGATGCAAGACCAGGACACTGGACTCGGAGCCTAAAAGTATTGAAGATCTTCCTGAGTGGAACTTTGATGGTTCCAGCACATATCAATCTGAGGGCTCCAACAGCGACATGTATCTCATCCCCTCTGCAATGTTCAGGGATCCTTTCCGCAAAGACCCCAACAAGTTGGTCTTGTGTGAGGTGCTCAAGTACAACCGGAAACCTGCTGAAACCAACCATCgttacaaatgtaaaaagatCATGGAAATGGTAGATCATCAGAGCCCTTGGTTTGGCATGGAACAGGAGTACACCATCCTGGGTACCGATGGACATCCATTTGGCTGGCCCTCCAATGGGTTCCCTGGTCCCCAAGGACCATACTACTGTGGAGTTGGAGCAGATAAAGCTTACGGCAGAGACGTTGTGGAGGCGCATTACAAAGCCTGCCTCTATGCTGGTGTAATGATCTGTGGAACCAATGCTGAAGTTATGCCAGCTCAGTGGGAGTTCCAGGTTGGCCCCTGTGAAGGCATCAACATGGGAGATCACTTGTGGGTAGCTCGTTTCATCTTGCACAGAGTTTGTGAAGATTTCGGTGTGGTAGCCTCATTTGATCCTAAGCCAATCCCAGGCAACTGGAATGGTGCTGGTTGCCACACTAACTTTAGCACCAAGGAAATGCGGGAAGATGGTGGGCTGAAATGCATTGAGGAGTGTATTGATAAGCTTGGAAAGAGGCACAACTACCACATTCGCGCCTATGATCCAAAGGGAGGCCTGGACAATGCTCGCAGACTGACTGGCCACCATGAAACCTCCAACATCCACGAGTTCTCTGCAGGTGTGGCAAACCGTGGTGCTAGCATCCGCATCCCACGAACCGTGGGACAAGAAAAGAAGGGTTACTTTGAGGATCGCCGACCGTCTGCCAACTGCGACCCCTATGCGGTGACCGAGGCCCTGATTCGCACATGTTTGCTTGATGAAGAGGGTGATGAACCTGTGGACTACTAGATCTCTCTTCTCCTGGACTGAACTGAACTGCCATACTtccctgttttctttttttttttttttaaatggccaAGCCAAATTAGTACTGTATCTTGTTTTCTATCAGGGCGGTTCTAACctggcattttaatattgttgaaGTTGACTGGTCAACTTAACACTATAAGATTAAATCAGAAGTTAACCTGATCTGACTGTGGACATGGTGTTGCAAGGCATGTCTCTCCCgttgtttttttcctgatttttaattgtttcttgGGGAGTGGATGTTCAGTGTATAGCATTGAAAGCTCTCTATGATCCCATGACTCTACCTTTTGTAGTTCAGATGAACTGAAACAAGTCAAATGCACAGAACCTGGGGCTGCCAAGGCTAGATATCTAATTTCTTTTAAACCAATAGCTAGTTGTTGCGTCTGTTGACTTGATTATTTCAAGTATGTAATGTTTCAATGCATCTTACTAACAGTGTATTAAATGGCAAATCTTGTTATCCATTTTGACTGTACACACTACGCTGTTTTTGTTGTGCGGTACACTTCACAGTCGAGGTCCAACAACTATCCTGTTTTTATACTTGTTGATCTGTTATTTGTCATGTTAAATCCCTGGTTCATCAAGGATTTGATCCTGTTTGTCTACTACTATGATGTAACTGCACCCATTTGGTAAAAACTGAAGTTGCTAAAAGGAgacttaaacatttattttttaccacaAA

Function

GO:

id name namespace
GO:0006542 glutamine biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004356 glutamate-ammonia ligase activity molecular_function

KEGG:

id description
K01915 glnA, GLUL; glutamine synthetase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU15209 lncRNA upstream 52301 8219265 ~ 8262830 (+) True G10219
TU15180 lncRNA upstream 224595 8081817 ~ 8090536 (+) False G10198
TU15177 lncRNA upstream 224595 8081946 ~ 8090536 (+) True G10198
TU15184 lncRNA upstream 225660 8083536 ~ 8089471 (+) False G10200
TU15183 lncRNA upstream 231100 8083536 ~ 8084031 (+) True G10200
TU15220 lncRNA downstream 203935 8522402 ~ 8528707 (+) False G10226
TU15223 lncRNA downstream 203935 8522402 ~ 8528707 (+) False G10226
TU15224 lncRNA downstream 203935 8522402 ~ 8528707 (+) False G10226
TU15228 lncRNA downstream 203935 8522402 ~ 8528707 (+) True G10226
TU15298 lncRNA downstream 241631 8560098 ~ 8561513 (+) True G10271
XM_043256906.1 mRNA upstream 924096 7388418 ~ 7391035 (+) True ptger4c
XM_043256194.1 mRNA upstream 968476 7340271 ~ 7346655 (+) False dmbx1a
XM_043256186.1 mRNA upstream 968476 7340271 ~ 7346655 (+) True dmbx1a
XM_043216752.1 mRNA upstream 1015030 7285670 ~ 7300101 (+) True gng12a
XM_043216746.1 mRNA upstream 1015030 7297986 ~ 7300101 (+) False gng12a
XM_043263850.1 mRNA downstream 54771 8373238 ~ 8382443 (+) False elovl1a
XM_043263841.1 mRNA downstream 58825 8377292 ~ 8382443 (+) True elovl1a
XM_043263798.1 mRNA downstream 68410 8386877 ~ 8403214 (+) True cc2d1b
XM_043263812.1 mRNA downstream 68410 8386877 ~ 8403214 (+) False cc2d1b
XM_043263803.1 mRNA downstream 68410 8386877 ~ 8403214 (+) False cc2d1b
TU15202 other upstream 207354 8106865 ~ 8107777 (+) True G10212
TU15034 other upstream 732746 7505591 ~ 7582385 (+) False G10108
TU14783 other upstream 1328012 6986298 ~ 6987119 (+) True G9925
TU14736 other upstream 1622756 6691668 ~ 6692375 (+) True G9889
TU14734 other upstream 1624352 6690372 ~ 6690779 (+) True G9887
XR_006252402.1 other downstream 844144 9162611 ~ 9171915 (+) False olfm3b
TU15832 other downstream 1428127 9746594 ~ 9751212 (+) True arpc5a
XR_006247735.1 other downstream 1593161 9911628 ~ 9916861 (+) True znf414
XR_006247736.1 other downstream 1593161 9911628 ~ 9915491 (+) False znf414
TU16308 other downstream 2392663 10711130 ~ 10718194 (+) True G10979

Expression Profile