RNA id: XM_043219197.1


Basic Information

Item Value
RNA id XM_043219197.1
length 2359
RNA type mRNA
GC content 0.45
exon number 15
gene id crispld1b
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 14195559 ~ 14203218 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gccgcGCAATGACTCATGATGACTCATTCATAAAGAAACTTCAagaatcaaagaatcaaaacaGCTGGACACGTGTAGCCTATTTGATATAGAAAACGGCAACGAAATTATTTCAGCAAATCAACGCCGGAGATAAACATCCACGCGCTGAACGGCAAAAGGCAGAGGACAGATACCACATTGGATTTTGTAACTGACAGCTGTGGAAACATGAAGTGTGGACATGAAGATTTATTTAGTGGGTTTTTGCTGCTTGTGACTGTCCAAACTGTGGCATCCATGGTGATTCCCAATGCCACCCACTTAGAAGCCATCCTGGAAAAATACATGGATAAGGATGAGGCGTGGTGGCAATCCAAGTCAAGAGGCAAAAGAGCAATTTCACAGAGCGATATGCAACTGATTCTTGACCTACATAATAAACTGAGGGGTCAAGTGTACCCCCCTGCCTCAAACATGGAGTACATGGTGTGGGACACTGAACTGGAGAGGAGCGCTGAGCACTGGGCACACACTTGTCTGTGGGAACATGGACCGTCTCACCTGCTGACCCGGATCGGCCAGAACCTGGGAGCTCACTGGGGCAGAGACAGACCTCCGACATTTCATGTCCAAGCCTGGTATGATGAAGTGAGAGATTTCAGCTACCCCTATCCACAAGAGTGTAACCCTCACTGCCCCTACAGATGCTCTGGACCCGTCTGCACACATTACACACAGCTGGTTTGGGCCACATCCAACAAAATTGGCTGTGCCATCAATGTGTGCTACAACATGAATGTATGGGGGATGATCTGGGCCAAAGCTGTGTACCTGGTCTGCAATTACTCTCCTCCAGGTAACTGGTGGGGACATGCACCATACAAACACGGGACCCCTTGCTCTGCCTGCCCACCCAGCTATGGTGGCGGTTGCAGAAACAATCTCTGCTATAAAGATGATGGCAGTCATTATCATTACACCCCGGAGACAGAGGAAAATAACTATATTGAACCAGAACCCGAGCCAGTTCGAAGCCATGACACCCACTACAGAGATGAGACCCCGACATCTTCTCCCAACGAGAACATCGAGAGGAACGAAGTCATCAATACTTCTCAGATGTctcAGCAAGTAGCATGTGATACTAGATTACGAGATCAGTGCAAAGGAACTACTTGTAACAGGTACGAATGCCCACCAGGCTGCTTGTACAACTATGGGAAAGTAATTGGATCGGGTCATTATGACATGCAATCCAGCATCTGTGGTAGCGGCTTGCATGCTGGAATAATAGATGATGATGGAGGCTGGCTGGATGTCACAAGGGTGGGCAGAAGGCAACGATTCTCAAAGTCCTTCAAAAATGGAGTTCAGACTCTGGCGAAAAATCAGAGCGCCAATGCCTTCACCGTATCAAATGTTCCAGTGAAAGCAGTTAATTGTGAAACTACGGTGGCACAATTCTGCCCTTTCAAGAAACCGGTCCGGCACTGCCCCAGgttgtATTGTCCTCGTAATTGCTTGTATGACAGCTATGCCAGAGTAACTGGAACCCGCTATTATTCAGATAATTCCAGCATATGCAGGGCAGCTATCCATGCAGGGGTGATTCGAAGTGACTCGGGAGGTTATCTGGACGTAATGCCTGTGGACAAGAGGAAGCAGTACAAGGGCTCCTACCAAAATGGCATCACCTCAGAGAGCCTACAGAATCCCTCAGGAGGCAAAGCGTTCCGAGTGTTTGCGGTCATTTGAAACCATCGTCCAAGGACAGATGCAAGGAAATAGAGCTCTTGGTAACATAACAGCCAGTAATTACCACGCATTTGGTTTGCTGGTCTTGCTGGGCTGGATTTTAGGCCAGTGCTGTCACGAAAAATCTCCtcaacaggaaaaaaagacattgacTTTGACACCATCTGGCCCTGAGAAAACAAAGTctccatgatttttttttcctctgtgtgtAAATGTCATGTATATAATGTGCTGTAAATATAGTGAACTTTATTCATTACATCCAttcttgtatgtttttataaaacgtatacatttgttattttaagcacGTAAAGCTTtccttaaaataacaaaataggcAATTgtgcatgcaaacacaaaagTGTTAATGTCTGAACGTGTAGAAAAGGCCATATacattagtttatatttttgtaaacatatttttatatcagtgttCAGAAGCTGCTCGTTGGTGTATTGCGCTTTACAGTATATTATGCTGCATATGTTCAAAATTTGATACTGTAACAACCTGGCAGGCCAGGAAATCATTATTGCTTTAGaagaatttgaaaaatgtaccaCAAAAGGAGCAGTGGAGacacatttttgtgttatttattttcatgcaatc

Function

GO: NA

KEGG:

id description
K24243 CRISPLD; cysteine-rich secretory protein LCCL domain-containing

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU17537 lncRNA upstream 9773 14136114 ~ 14185786 (+) False G11832
TU17582 lncRNA upstream 28604 14108155 ~ 14166955 (+) True G11856
TU17577 lncRNA upstream 31182 14140050 ~ 14164377 (+) True G11855
TU17578 lncRNA upstream 31182 14140050 ~ 14164377 (+) False G11855
TU17576 lncRNA upstream 44700 14131759 ~ 14150859 (+) False G11855
TU17629 lncRNA downstream 166470 14369688 ~ 14371834 (+) True G11894
TU17630 lncRNA downstream 168700 14371918 ~ 14375750 (+) True G11895
TU17635 lncRNA downstream 185767 14388985 ~ 14437409 (+) True G11898
XR_006252197.1 lncRNA downstream 292232 14495450 ~ 14497873 (+) True LOC122355240
TU17656 lncRNA downstream 356642 14559860 ~ 14603545 (+) True G11914
XM_043257000.1 mRNA upstream 849 14190469 ~ 14194710 (+) True pi15b
XM_043255093.1 mRNA upstream 41887 14152066 ~ 14153672 (+) True tmem70
XM_043216912.1 mRNA upstream 53702 14139477 ~ 14141857 (+) True rdh10b
XM_043216903.1 mRNA upstream 59548 14117486 ~ 14136011 (+) True kcnb2a
XM_043219771.1 mRNA upstream 90054 14099350 ~ 14105505 (+) True dnajb6a
XM_043220352.1 mRNA downstream 11276 14214494 ~ 14218551 (+) True socs6b
XM_043254388.1 mRNA downstream 30601 14233819 ~ 14241872 (+) True LOC122355826
XM_043257269.1 mRNA downstream 39455 14242673 ~ 14244944 (+) True atpsckmt
XM_043257245.1 mRNA downstream 42037 14245255 ~ 14262414 (+) True march6
XM_043257257.1 mRNA downstream 59346 14262564 ~ 14273620 (+) True ankrd33bb
TU17566 other upstream 15944 14175364 ~ 14179615 (+) True G11854
TU17573 other upstream 15944 14175364 ~ 14179615 (+) False G11854
TU17265 other upstream 1322414 12867983 ~ 12873145 (+) False rnf152
TU17266 other upstream 1322474 12867983 ~ 12873085 (+) False rnf152
TU17183 other upstream 1569172 12623823 ~ 12626387 (+) True LOC122358236
XR_006252462.1 other downstream 573104 14776322 ~ 14782977 (+) False ackr4a
XR_006252465.1 other downstream 573104 14776322 ~ 14782704 (+) False ackr4a
TU18526 other downstream 2063825 16267043 ~ 16268797 (+) True G12531
TU18915 other downstream 2829101 17032319 ~ 17037297 (+) False golim4b
XR_006252905.1 other downstream 3159027 17362245 ~ 17367861 (+) False sppl2

Expression Profile