Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043219222.1 |
| length | 782 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 6 |
| gene id | rps8a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056700.1 |
| NCBI id | CM032069.1 |
| chromosome length | 25613461 |
| location | 12278732 ~ 12281207 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0051726 | regulation of cell cycle | biological_process |
| GO:0006414 | translational elongation | biological_process |
| GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | biological_process |
| GO:0009790 | embryo development | biological_process |
| GO:0022627 | cytosolic small ribosomal subunit | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02995 | RP-S8e, RPS8; small subunit ribosomal protein S8e |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU16942 | lncRNA | upstream | 177606 | 12100875 ~ 12101126 (+) | True | G11419 |
| TU16629 | lncRNA | upstream | 659869 | 11614241 ~ 11618863 (+) | True | G11207 |
| TU16626 | lncRNA | upstream | 665166 | 11609251 ~ 11613566 (+) | True | LOC122328936 |
| XR_006247857.1 | lncRNA | upstream | 667645 | 11610475 ~ 11611087 (+) | False | LOC122328936 |
| TU16616 | lncRNA | upstream | 777146 | 11500389 ~ 11501586 (+) | False | mast3a |
| TU17037 | lncRNA | downstream | 56460 | 12337667 ~ 12339049 (+) | True | G11505 |
| TU17175 | lncRNA | downstream | 264146 | 12545353 ~ 12545592 (+) | True | G11590 |
| TU17178 | lncRNA | downstream | 333168 | 12614375 ~ 12614596 (+) | True | G11593 |
| TU17180 | lncRNA | downstream | 334788 | 12615995 ~ 12621414 (+) | True | G11595 |
| XR_006252588.1 | lncRNA | downstream | 342622 | 12623829 ~ 12624952 (+) | False | LOC122358236 |
| XM_043262125.1 | mRNA | upstream | 665 | 12270887 ~ 12278067 (+) | False | hectd3 |
| XM_043262126.1 | mRNA | upstream | 665 | 12270887 ~ 12278067 (+) | False | hectd3 |
| XM_043262124.1 | mRNA | upstream | 665 | 12270888 ~ 12278067 (+) | True | hectd3 |
| XM_043255426.1 | mRNA | upstream | 21845 | 12204405 ~ 12256887 (+) | True | efna2a |
| XM_043255435.1 | mRNA | upstream | 21845 | 12204409 ~ 12256887 (+) | False | efna2a |
| XM_043220644.1 | mRNA | downstream | 52580 | 12333787 ~ 12336926 (+) | True | lrrc42 |
| XM_043220645.1 | mRNA | downstream | 52580 | 12333787 ~ 12336926 (+) | False | lrrc42 |
| XM_043220887.1 | mRNA | downstream | 74681 | 12355888 ~ 12359062 (+) | False | ttpa |
| XM_043220880.1 | mRNA | downstream | 74686 | 12355893 ~ 12359062 (+) | True | ttpa |
| XM_043260495.1 | mRNA | downstream | 80513 | 12361720 ~ 12376736 (+) | False | asph |
| XR_006252734.1 | other | upstream | 341142 | 11908073 ~ 11937590 (+) | False | pld1a |
| TU16617 | other | upstream | 773002 | 11502402 ~ 11505730 (+) | False | mast3a |
| TU16613 | other | upstream | 778654 | 11496360 ~ 11500078 (+) | False | mast3a |
| TU16615 | other | upstream | 779795 | 11496360 ~ 11498937 (+) | False | mast3a |
| TU16565 | other | upstream | 937621 | 11339863 ~ 11341111 (+) | False | mrpl34 |
| XR_006247863.1 | other | downstream | 165 | 12281372 ~ 12281504 (+) | True | LOC122328950 |
| TU17183 | other | downstream | 342616 | 12623823 ~ 12626387 (+) | True | LOC122358236 |
| TU17265 | other | downstream | 586776 | 12867983 ~ 12873145 (+) | False | rnf152 |
| TU17266 | other | downstream | 586776 | 12867983 ~ 12873085 (+) | False | rnf152 |
| TU17566 | other | downstream | 1894157 | 14175364 ~ 14179615 (+) | True | G11854 |
