RNA id: XM_043219771.1


Basic Information

Item Value
RNA id XM_043219771.1
length 1510
RNA type mRNA
GC content 0.44
exon number 11
gene id dnajb6a
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 14099350 ~ 14105505 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AAGGACGTGACGTCAAATCTCTCTAAAACCCCCCAGAAGATTCGTGTTATTTCCGGACGCTTCGTTGCTTGTCACATCAGCTCGATACAGCGTCCCGCAGACAGAGGTTAGAGGACCGAAAACAGAGCAGCTGCCTCTGGCAGTTAAAACACAAGCAATTGAAGTCGGTGGCCATGGATGACGACTATTACGTGATTTTAGGGGTGCAGAGAACTGCATCTCCAGATGACATCAAAAAAGCTTACAGGAAACTAGCTCTCAAGTGGCATCCAGATAAGAATCCTGATAACAAGGAAGAGGCGGAAAAGAAGTTTAAACAGCTTTCAGAAGCTTATGAAGTCTTATCAGATGCAAACAAAAGGAACGTATACGATCGGTATGGAAAAGAAGGCTTAACTCCAGGTGGAGgaggaggaagaggacacTTTAATAATGACCACTTCGGAGGATTTACATTCCGTAATCCAGAGGATGTCTTCAGGGAATTCTTTGGTGGACAAGATCCATTTGCAGACTTCTTTGGTGGAGATCCATTTGATGATGACTTCTTTGGTGGAGGTCGGCGGCACCACCATCACCAGCGGGGCATGAGCAGGAGCCGGACAGGAGGGTCCTTCTTTGGAGGTTTTGGGGGATTCCCACCTTTTGGGGCAGGATTTTCATCTTTTGATGCAGGTTTCTCTCCCTTTGGCCATATGGGAGGAGGTGGATTTACTTCTTTCTCTTCAACTTCATTtggtggaggaggaggaggggAGGGGGGGGAGGGGGGAGGTGGCGGAGGCATGGGCAGTTTCCGCTCTGTGTCCACCTCCACTAAATTCATCAATGGCAGGAAAATCACTACAAAAAGAATCGTGGAGAATGGACAGGAGCGTGTAGAAGTGGAAGAAGATGGACAGTTAAAATCTCTAACCATAAATGGAAAAGCCCAGGAGTTAGGCATGCTGGAGGGTCACAGACAGAGGAAGGAGCTCCCTgactcctcttcctcctcctcctcctcttcctcctcctcacaTTCTGCAAGGCAGTCAGCTCAGAGAGAGGAGCAAAATAAAACTACAGGCAAAGAGCAAACTGGAGTCAAGAGGAAGAGAATGACGGTGAAGGGAGAGACCAAAAAGGCCAAAGAGTCCTAAATTTGTCTCTGCATCTCCACTCATAGTACTGATAGTCTGACATACTGTAGCTGTGGATATTCTGTGTTGAGGCTGGAAAAACTAGCTAGCAATTTGTTACTACTTTTGTTTTAACgcaaaagtaaaattatttttacgttttttttttaaagccgcTACTAATCGGTAACAAGTAGTTAATTATCTGCTCTGAAAAACTGTGACTGATGCACAAATTTAAAGAATGagaatgaataattttaatgaaaatgtgcaaGCATTTCTCATTTGCATGATCCACACAGTTTATTGAATGAATAAACGCAACACAACAAATGTACATGGATTTTTCAGTAATAAAACCGGACTTGCCTTTGgttgaatttaaa

Function

GO: NA

KEGG:

id description
K09514 DNAJB8; DnaJ homolog subfamily B member 8

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006252504.1 lncRNA upstream 503 14091564 ~ 14098847 (+) True LOC122357607
XR_006252505.1 lncRNA upstream 503 14091564 ~ 14098847 (+) False LOC122357607
TU17546 lncRNA upstream 832 14096839 ~ 14098518 (+) False LOC122357607
TU17513 lncRNA upstream 31255 14002545 ~ 14068095 (+) True G11820
TU17543 lncRNA upstream 47730 14048717 ~ 14051620 (+) True G11836
TU17582 lncRNA downstream 2650 14108155 ~ 14166955 (+) True G11856
TU17576 lncRNA downstream 26254 14131759 ~ 14150859 (+) False G11855
TU17537 lncRNA downstream 30609 14136114 ~ 14185786 (+) False G11832
TU17538 lncRNA downstream 30609 14136114 ~ 14144277 (+) True G11832
TU17577 lncRNA downstream 34545 14140050 ~ 14164377 (+) True G11855
XM_043224053.1 mRNA upstream 23907 14051753 ~ 14075443 (+) True rbm33b
XM_043256021.1 mRNA upstream 60176 14035516 ~ 14039174 (+) True en2b
XM_043220658.1 mRNA upstream 83455 14009083 ~ 14015895 (+) True htr5aa
XM_043216938.1 mRNA upstream 107026 13951333 ~ 13992324 (+) False si:ch211-207d6.2
XM_043216945.1 mRNA upstream 107026 13965797 ~ 13992324 (+) False si:ch211-207d6.2
XM_043216903.1 mRNA downstream 11981 14117486 ~ 14136011 (+) True kcnb2a
XM_043216912.1 mRNA downstream 33972 14139477 ~ 14141857 (+) True rdh10b
XM_043255093.1 mRNA downstream 46561 14152066 ~ 14153672 (+) True tmem70
XM_043257000.1 mRNA downstream 84964 14190469 ~ 14194710 (+) True pi15b
XM_043219197.1 mRNA downstream 90054 14195559 ~ 14203218 (+) True crispld1b
TU17265 other upstream 1226205 12867983 ~ 12873145 (+) False rnf152
TU17266 other upstream 1226265 12867983 ~ 12873085 (+) False rnf152
TU17183 other upstream 1472963 12623823 ~ 12626387 (+) True LOC122358236
XR_006247863.1 other upstream 1817846 12281372 ~ 12281504 (+) True LOC122328950
XR_006247873.1 other upstream 1818691 12280590 ~ 12280659 (+) True LOC122328989
TU17566 other downstream 69859 14175364 ~ 14179615 (+) True G11854
TU17573 other downstream 69859 14175364 ~ 14179615 (+) False G11854
XR_006252462.1 other downstream 670817 14776322 ~ 14782977 (+) False ackr4a
XR_006252465.1 other downstream 670817 14776322 ~ 14782704 (+) False ackr4a
TU18526 other downstream 2161538 16267043 ~ 16268797 (+) True G12531

Expression Profile