Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043219924.1 |
| length | 1752 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 13 |
| gene id | LOC122325065 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056700.1 |
| NCBI id | CM032069.1 |
| chromosome length | 25613461 |
| location | 579773 ~ 594221 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006103 | 2-oxoglutarate metabolic process | biological_process |
| GO:0009058 | biosynthetic process | biological_process |
| GO:0042853 | L-alanine catabolic process | biological_process |
| GO:0030170 | pyridoxal phosphate binding | molecular_function |
| GO:0004021 | L-alanine | molecular_function |
| id | description |
|---|---|
| K00814 | GPT, ALT; alanine transaminase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU12432 | lncRNA | downstream | 28071 | 548034 ~ 551702 (-) | True | G8273 |
| XR_006247269.1 | lncRNA | downstream | 175951 | 398126 ~ 403822 (-) | True | LOC122325225 |
| TU12411 | lncRNA | downstream | 210325 | 291406 ~ 369448 (-) | True | G8257 |
| XR_006247263.1 | lncRNA | downstream | 355885 | 223256 ~ 223888 (-) | True | LOC122325194 |
| TU12371 | lncRNA | downstream | 357627 | 203565 ~ 222146 (-) | False | G8237 |
| TU12442 | lncRNA | upstream | 25531 | 619752 ~ 635841 (-) | False | G8279 |
| TU12448 | lncRNA | upstream | 26206 | 620427 ~ 629491 (-) | False | G8280 |
| TU12450 | lncRNA | upstream | 26206 | 620427 ~ 629491 (-) | False | G8280 |
| TU12453 | lncRNA | upstream | 26206 | 620427 ~ 629491 (-) | False | G8280 |
| TU12441 | lncRNA | upstream | 33595 | 627816 ~ 635841 (-) | True | G8279 |
| XM_043220030.1 | mRNA | downstream | 12973 | 564663 ~ 566800 (-) | True | LOC122325126 |
| XM_043219876.1 | mRNA | downstream | 64049 | 468596 ~ 515724 (-) | True | LOC122325042 |
| XM_043220133.1 | mRNA | downstream | 134200 | 432668 ~ 445573 (-) | True | LOC122325182 |
| XM_043219896.1 | mRNA | downstream | 263088 | 294469 ~ 316685 (-) | False | LOC122325049 |
| XM_043219888.1 | mRNA | downstream | 263088 | 294469 ~ 316685 (-) | True | LOC122325049 |
| XM_043219978.1 | mRNA | upstream | 2991 | 597212 ~ 601234 (-) | True | LOC122325090 |
| XM_043220108.1 | mRNA | upstream | 7693 | 601914 ~ 603944 (-) | False | LOC122325167 |
| XM_043254365.1 | mRNA | upstream | 74079 | 668300 ~ 680383 (-) | True | gipc2 |
| XM_043254355.1 | mRNA | upstream | 86454 | 680675 ~ 685013 (-) | True | dnajb4 |
| XM_043261618.1 | mRNA | upstream | 248994 | 843215 ~ 875227 (-) | True | pigk |
| TU12372 | other | downstream | 355839 | 198628 ~ 223934 (-) | False | G8237 |
| TU12376 | other | downstream | 356628 | 214738 ~ 223145 (-) | False | G8237 |
| TU12374 | other | downstream | 428143 | 142744 ~ 151630 (-) | False | G8237 |
| XR_006246996.1 | other | upstream | 585724 | 1179945 ~ 1202987 (-) | False | dipk2aa |
| XR_006247871.1 | other | upstream | 789487 | 1383708 ~ 1383784 (-) | True | LOC122328985 |
| XR_006247866.1 | other | upstream | 789869 | 1384090 ~ 1384275 (-) | True | LOC122328960 |
| XR_006247864.1 | other | upstream | 790476 | 1384697 ~ 1384875 (-) | True | LOC122328955 |
| XR_006247870.1 | other | upstream | 790876 | 1385097 ~ 1385166 (-) | True | LOC122328981 |
