RNA id: XM_043220670.1


Basic Information

Item Value
RNA id XM_043220670.1
length 2073
RNA type mRNA
GC content 0.48
exon number 7
gene id klhl6
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 17009566 ~ 17014352 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GAGAGGCCTCAGCACTTCCTCTTTGTAGTCCGTTGTAAAAACAGGAAGCTCGAGTGTTAGGAAAGAACAGTTAAGCTTTAGCTCTAGTGTTTCGCCAATATCTAGACATCACATGTTGTTACACTTGATTTAGGGTAGAAATCTAGCTTTTTTTGAGCTCTGGATCATGGCTGACACTTTAGAGAATAACTCGGAGTGCCCTCCATCTGTCATGAGCGAAGCTTCGGCGGGCGGTCTGAGCATACTGGAGAGCTCCATGCAGGAGAACCGACAAGACGGGCAGGTTGTTTTTGAAGACTCTGTGTTTGCTGGTTATTTGCAGGATGGACTGCACAGTCTCCGGCTGGAGGACAGCTTAACCGATGTCAGCCTCCACGTACAGGGTCAAAGCTTCCAGTGCCATCGAGTGGTCCTCGCTGCTGCCAGCCACTATTTCAGagCAATGTTTTGTAATGACTTGAGAGAAAAAcgtgaagaaaatgtaaatattaaaggCACTGATGCTGACACAATGGAAATCCTGTTAGAATACACTTACACCAGCAAAGTCGTCATAACCAAGGACAATGTTCAGAGAATGCTTGAGGCAGCCAGTCTATTTCAGTTCCCACGTATAGTAGATGCATGTGCCAGTTACTTAGAAGAAGCCCTTCACCCGGAAAACTGCGTGGGAATCCTGCATCTAGCCGATGTGCATTCGCTGGAGTCTTTGAAAGCCCAAGTCTACTCCTTCATTATCCAAAACTTCTCTCAAGTGGTAGACCATGATGAGATCCTTGAGCTTCCTGCGGATGTGTTGGTCAGTCTGCTCCAGCATGACGACTTGGGGGTGACAGAAGAAGAGCAGGTGTTTGATGTGGTCATGCGTTGGCTGAGGGCCCGAAAGGATGAAAGAGTAGCTCAGCTGCCCCGTGTGCTCACACATGTGAGGCTGCCCTTGTTGGACCCGTGGTATTTTGTAGAAAGGGTGGAAGGAGACCCTCTGATCCGCCAGTGCGCCGAGGTGTTCCCACTGCTGCAGGAGGCCCGTGTTTATCACCTCTCGGGCAAAGAGGTCAGTTTTACAAAGGTGATCTCAGAGCGCACCAAACCTAGAGTGCGGGAGTACCAGTCTGAGGTGTTTATGATCATCGGAGGATGCACAAAAGATGAGAAGTTTGTATCCGAGGTGACCTGTCTAGACCCATTACGCCGGAGTCGCTTAGAAGTCGCAAAACTACCGAACACGGACATGGAAGCTGAGAATGAAAATAAGAAGTGGGTGGAGTTTGCATGTGTCACCTTCAGAAATGAAGTCTACATATCAGgTGGCAAGGAAACTCTGCACGACGTATGGAAGTATAATGCATCGCTAAACAAATGGATCCAGATTGAGTTTCTGAACACAGGCCGCTGGAGACACAAGATGGCAGTTGTTGGAGGAAAAGTATATGTTTTGGGTGGCTTTGATGGAACACAGAGACTGAACAGTGTTGAAGGCTACGATCCATTTCACAACTGCTGGACAGAGACAGCACCGCTCATGCTGAGTGTAAGCTCCTTCTCTGCTGCCAGCTATGACAAATACATCTTTGTGATCGGTGGAGGCCCTAATGGCAAGCTTGCCACAAACAACATGCAGTGCTTTGATTCCTTATCAAAcaaatggagtttaaaatgccCGATGCCAACTGAGGCCAAATGCACAAACGCAGTCACCTTTAACGATgccatttttgttgttgGTGGTGCGATGAAGGCCTTGTATTCGTACAGTCCTCTGGAAGACTCCTGGACGCTAATAATCCAGCTGGGATGTGAGAGGGCCAGCTGTGGCATTGCTGCCTGCAATAACAAGCTCTTCATTACTGGTGGCCGTGATGACAAGAACGAAGTGATTGCCACCGTTCTCTGCTGGAACCCAGAGACAAAAAAGTTGACTGAGGAGTGTGTGCTTCCCCGTGGAGTGTCTCACCATGGCAGTGTGACTCTCAGGAAGTCCTACACACATATACGCAGAATAACACCTGGAACAGTCACCGGATGACAAATTCAGCAGCTTCAGagactaacttttttttttttttttttttt

Function

GO: NA

KEGG:

id description
K10444 KLHL6; kelch-like protein 6

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU18886 lncRNA upstream 30810 16950834 ~ 16978756 (+) False G12782
TU18885 lncRNA upstream 37028 16962728 ~ 16972538 (+) False G12782
TU18884 lncRNA upstream 37028 16970362 ~ 16972538 (+) True G12782
TU18889 lncRNA upstream 42464 16958408 ~ 16967102 (+) True G12784
TU18875 lncRNA upstream 52307 16936932 ~ 16957259 (+) True G12776
TU18939 lncRNA downstream 108787 17123139 ~ 17123367 (+) True G12818
TU18944 lncRNA downstream 118725 17133077 ~ 17134888 (+) True G12823
TU19158 lncRNA downstream 146824 17161176 ~ 17162972 (+) True G12972
TU19161 lncRNA downstream 167832 17182184 ~ 17270444 (+) True G12975
TU19169 lncRNA downstream 172765 17187117 ~ 17190607 (+) True G12982
XM_043220682.1 mRNA upstream 339 16997089 ~ 17009227 (+) True pak2a
XM_043220730.1 mRNA upstream 12951 16994689 ~ 16996615 (+) True ing5b
XM_043220723.1 mRNA upstream 12951 16994693 ~ 16996615 (+) False ing5b
XM_043255548.1 mRNA upstream 162011 16843721 ~ 16847555 (+) True LOC122356618
XM_043262435.1 mRNA upstream 233219 16772588 ~ 16776347 (+) False LOC122361622
XM_043224682.1 mRNA downstream 10831 17025183 ~ 17029802 (+) True ptx3b
XM_043224672.1 mRNA downstream 10839 17025191 ~ 17029802 (+) False ptx3b
XM_043256547.1 mRNA downstream 17787 17032139 ~ 17039903 (+) True golim4b
XM_043256557.1 mRNA downstream 17787 17032139 ~ 17039903 (+) False golim4b
XM_043256563.1 mRNA downstream 17787 17032139 ~ 17039903 (+) False golim4b
TU18526 other upstream 740769 16267043 ~ 16268797 (+) True G12531
XR_006252462.1 other upstream 2226589 14776322 ~ 14782977 (+) False ackr4a
XR_006252465.1 other upstream 2226862 14776322 ~ 14782704 (+) False ackr4a
TU17566 other upstream 2829951 14175364 ~ 14179615 (+) True G11854
TU18915 other downstream 17967 17032319 ~ 17037297 (+) False golim4b
XR_006252905.1 other downstream 347893 17362245 ~ 17367861 (+) False sppl2
TU19352 other downstream 552489 17566841 ~ 17567916 (+) True G13114
TU19349 other downstream 592900 17607252 ~ 17608092 (+) True G13111
XR_006247303.1 other downstream 764987 17779339 ~ 17782364 (+) False LOC122325453

Expression Profile