RNA id: XM_043221393.1


Basic Information

Item Value
RNA id XM_043221393.1
length 2803
RNA type mRNA
GC content 0.46
exon number 11
gene id mllt1b
representative False

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 9917331 ~ 9927244 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGGAAGTTAAAATATGGCTAGCTGTGGAAAAACCAAGATTTTGCTAAATTGTatgaattttaaacaattaGGATTGAAGGACGATAACGTTCTGGTTATTGTTCATTTAGATTGACTCAGTTTAGTAGTattatatcttattatattattataatagtattataaCCCTAATccacaaactaaaaaaatgtgtgttttttcaaTGTTACTTTTTCCTATCCCGGTTACATGTGCGGAGACAACCATAATTTGTAAAGAACCCCCGTTTAAAGTGGAAGAGTCAGGCTATGCTGGTTTTCTCATGCCTATAGAGGTCTATTTCAAAAACAAGGAGGAGCCTAAAAAGGTGTGCTTTAATTATGACCTTTTCTTGAACCTGGAGGGCAACCCACCCGTCAACCACCTGCGCTGTGAGAAACTCACATTTAACAACCCCACACACGAGTTTCGGCGCAAGCTGGTCAAGGCCGGTGGGGCTGTAGTTATTCCTGAGGGAGCGGAGATGATGCCAAGGCCCAGTCCAGATTATCCAATGCTGCCTACTATTCCACTCTCTGCCTTCTCAGACCCCAAGAAAATCAAGTCCTCTCACGCTGTAAAGGAGTCGAGTAAAGATGGAGGAAGTGGGAGCAGCAAAGCCCTCAAAGCCCATAAGGCAACCAAAGAGCACCGAGAGCGCACACGAAAGGATTCAGAGAGCAAGGCCACATCCAGAGAGAGCGACCGAGAGAGTGGCAAGTCCTCACGAGACCAATCGTCATCCTCTTTTTCAAAGAAAGCCCCAGATGGCAGAGCGAAAGATGAGGGGAAAACTGTGCCCAAAGCAGCCTTCAAAGAGCCCAAACTCACAGTCAGAGAGTCCAAGATGGATGGTATGTCTCCAAAAGGTGGAGGAGCGGTGACGGGCGGAGGGGGACAGCTGGACTCTCGTGCCCCGAGCAAGAGGCCGTCGTCCGCCACCGAGTCTCCAAAGCTGAGTACCAAGAAACAGAAGAGGATGGGCTCTGAGGGCATGAAGGGGCCTGTGAGCGTAAGCTACAGCAGCAACTCTCCCCGCATTACCTCAACAACACCCTCCACGTTCCCCGAGAAGAAAACACCGAAAGATAAAGGCCACTGGGCAAAGATGAAACCCGAGGTGCAGGAAGTGAAAAGGCAGCCCGAATCCGACGAATCTAACTCTGAGGATGAAGCTTCTTCCAAATCGGAGCAGTCGGCTCCATCCAGCCCTTCTAGTTCCAGCACCAGCTCCAGCTCTGATTCTGACTTTGAGCCGTCGCAGAAGCAAGGCCAAGGGCCGCTCCGTTCTATGGTAGAGGATATGCGCTCTGAAGGCTCTGATGATGACAGCAGCTCTGAGGTTGAGACACCCATGAAGGCGACTCCACCTAACCAGGACTCTCGtttaagCATGGACAGTGAGAGTGATGGCAACGAGGAGTCTCGTCCTCCCAGCCAGGAAGCCCCCTCACCTCTACCCAAACTCAGCTCAGCAAACCTCAAGATGTTAGGAAAAAAGAGCCCAGATTCTTGCACCCGTGAGAAAGTGCTCAAGAGGGGATACGACAAGGTAGGAAGGGCTTATACAGAGGAGCTTGTGGACCTCCATCGTAGACTGATGGCTTTGAGAGAGAGGAACATTTTACAGCAGATCGTGAACCTAATAGAAAAGACCGGCCATTTCAACATCACCAATACAACCTTTGACTTTGACCTGTTCTCCTTGGATGAGTCGACTGTACGTAAACTCCAGAGCTACCTGGAAGCCACATCCACATGACACAAGGAAGCTGCTCGGCCGTGATTTTTGCATGAGAGAGGCCTCCAAACTGACAGGGGGCAGAGGGAAAGGTATCGAAAGCAACATATAAATGCAcaggaacaaacaaaaacgaaatgagaaaacaacaaaaaaaacaaaaactttatacTGTAATagaaataagcaaacaaaaaggACCAGGGGCGGAATTCAGGGTTTATCTAATAACAGCACTGCGCATTGCACTAAGAATCAAACTGTTGGCACAATACTGTCCAAAACGGACAAGATCTCGCATAGGCACCGTGGATGAGCTACCGTATCACAAGTAGGTACATTTAAAGACTGGTTTTGCACCAAAGCTATAACACTGGTGGAAAGGATCCTCGGCTCGGGCCTTTATGCAGGGGCGATGACTGAAAGACTGTGTCCCTTCTCTCCCCCGTCACTCTTCTGCTCAACGTACGTCACCCACTCAGCACAGCCTGGTGGCGTGGAAAGAGCCCAACTAGATCAAACCTTATCAGCATACTGTATGTGTCTGCATAGCTTTGTAGCCCCAACGTGTTGGATAAAGTACATACTCTCAAGCTTTGGTGATAGACGCTCCCTCGGATCAGCTGAAGGGGAAAAACTATCTGCCTTTGTAGTGCCTTTTTAAAAtctcatgtttttaattataattgtttgTGAGTCTCTCATCGGTCTTTGGATGACCAAAAATGATCTGTCAACGTTAAAATGCCTGAAATTGACATTCAAAGCCCTTTTAAACATGGTTTAATACCTGTCCGGAGAGAACACGTTATGGGAGAACCGTTCTGCATGTGTGATCTGAGAAGGTCTTGCGCATTATTCTATGTTTTCTTGATGGTCAGCGACACAAAGTCAATTTGTTACGCATTTGAAGTTCCTTTCGTAGTTTATTTAAGTAACTGTGCACTTTTTCTGGTCACTTCAGTGCTTTGTAATTATCTGATAActatatttatgattattttctcttttttttttttttttttttttacataatattgactt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU15857 lncRNA upstream 93677 9825615 ~ 9826220 (+) True G10674
TU15761 lncRNA upstream 316054 9602366 ~ 9603843 (+) True G10604
TU15733 lncRNA upstream 342491 9577171 ~ 9577406 (+) True G10581
TU15718 lncRNA upstream 347104 9486177 ~ 9572793 (+) True G10571
TU15953 lncRNA downstream 61899 9989143 ~ 10010746 (+) True G10738
TU15974 lncRNA downstream 65540 9992784 ~ 9993395 (+) True G10749
TU15979 lncRNA downstream 84693 10011937 ~ 10014366 (+) True G10752
TU15980 lncRNA downstream 87315 10014559 ~ 10015822 (+) True G10753
TU16060 lncRNA downstream 131288 10058532 ~ 10063814 (+) True G10819
XM_043223563.1 mRNA upstream 3036 9911628 ~ 9916861 (+) False znf414
XM_043223571.1 mRNA upstream 3036 9911649 ~ 9916861 (+) False znf414
XM_043223587.1 mRNA upstream 5028 9911628 ~ 9914869 (+) False znf414
XM_043253543.1 mRNA upstream 63136 9851285 ~ 9856761 (+) True prrx1a
XM_043258980.1 mRNA upstream 114207 9781765 ~ 9805690 (+) True niban1b
XM_043221924.1 mRNA downstream 1182 9928426 ~ 9940747 (+) True sap130b
XM_043224123.1 mRNA downstream 15617 9942861 ~ 9961475 (+) True myo7bb
XM_043219759.1 mRNA downstream 109295 10036539 ~ 10040853 (+) True agxtb
XM_043253597.1 mRNA downstream 119604 10046848 ~ 10049106 (+) True thap4
XM_043253606.1 mRNA downstream 119604 10046848 ~ 10049106 (+) False thap4
XR_006247735.1 other upstream 3036 9911628 ~ 9916861 (+) True znf414
XR_006247736.1 other upstream 4406 9911628 ~ 9915491 (+) False znf414
TU15832 other upstream 168685 9746594 ~ 9751212 (+) True arpc5a
XR_006252402.1 other upstream 747982 9162611 ~ 9171915 (+) False olfm3b
TU15202 other upstream 1812120 8106865 ~ 8107777 (+) True G10212
TU16308 other downstream 783886 10711130 ~ 10718194 (+) True G10979
TU16555 other downstream 1312882 11240126 ~ 11256764 (+) False kcnh2a
TU16565 other downstream 1412619 11339863 ~ 11341111 (+) False mrpl34
TU16613 other downstream 1569116 11496360 ~ 11500078 (+) False mast3a
TU16615 other downstream 1569116 11496360 ~ 11498937 (+) False mast3a

Expression Profile