RNA id: XM_043223690.1


Basic Information

Item Value
RNA id XM_043223690.1
length 1429
RNA type mRNA
GC content 0.57
exon number 2
gene id foxl2b
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 22638886 ~ 22640594 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGCACGAGTCGAGTCTGACGACAGCAGAGTTTCGCCTTTCActcgaggaaaaaaaaaaaaaaagtcgcagGATCCTCGAGAAGAGCCTCGGAGTTTAAACGACGCCGAGCCCTCGAGTCCGTCACAGCCGCCGCGAGCGTCCCCAAAGCAGGAGCTGGATTTATTTCCTTCGAAAGTCCCGAGACTCAGGGATCCGCGGTGACCCGATGCGCGCACCGAACATCCAGAGCTAAAAGCAGTGATGGCATCTTACCATAGCTTGGACGATGACGCAATGGCTTTGATGGTCCACGACACGAACGCGGTGAAGAAAGAAGAGGAGTTCGCGAAGGACGCGCCGCTCCAAGAGCCGGCTTCCGAGAAGGCGGACGCGTCTCAGAAGCCGCCTTACTCCTACGTGGCTCTGATCGCCATGGCCATCCGGGAAAGCGCGGAGAAGCGGCTGACCCTGTCCGGGATCTACCAGTACATCATCACCAAGTTCCCGTTCTACGAGAAGAACAAGAAGGGGTGGCAGAACAGCATCCGACACAACCTGAGTCTCAACGAGTGCTTCATCAAAGTTCCGCGCGAAGGCGGAGGGGAGCGAAAGGGCAACTACTGGACTCTGGATCCGGCCTGCGAGGACATGTTCGAGAAGGGCAACTACCGGCGGCGGAGGCGCATGAAGCGTCCCTTCAGGCCGCCGGCGGCTCACTTCCAGCCGGGCAAGGCTCTCTTCGGCGGGGAGGGATACGGAAGCTTCCTCCCCGCGCCCAAGTACCTCCAATCCGGCTTCATGAACAACAGCTGGCCGCTCGCGCAACCGGCGCCGCCGATGAGTTACGCGTCTTGCCAGATGGCCAACGGCAACATGGGTGCCATGAAAGGACTGTCGGGTCCGTCGTACAACCCCTACAGTCGAATGCAAGCCATGGGGCTGCCGAACATGATGAACTCGTACGGCGGGATGGGGCACCACCAGCACCAGGCCTCGCCGGCGGCGCAGCAGCCTTCGCCGGTTCCGTCCAACTCCGCGGCCGCCCTGCAGTTCACCTGCTCCCGCCAGCCGCCGGAGCTCTACTCGTACTGGGACCACGAGGTCAAAAACTCGTCGTTGCATTCGCGGATTGACATTTGAACGGCGAGAGCGCGCGCGGAGGGTTCGCGCATCGGGCAAACAGGGTAACGTTGTGTTGCTGAAGAACGAACGCGTATCTGAACAGACCTCGGCCCCCGTAGATGTTCTGGACTGCGTGGataattttgttcttttttattctaaatCAGTAGTTTGTGATGCGATCGCGACACGACAGACGTGCCCTGATCGAAAGCGCGTCGGCGAGATTGTTTGGGACCAttgtgatttttacatttttattttttggattgtCAAACCAGCACTTATTCATTTCTGATTGCTTTCAATAAactgttttgattaaaa

Function

GO: NA

KEGG:

id description
K09405 FOXL; forkhead box protein L

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU21473 lncRNA upstream 52636 22574923 ~ 22586250 (+) False G14541
TU21475 lncRNA upstream 60663 22577023 ~ 22578223 (+) True G14542
TU21474 lncRNA upstream 62594 22522411 ~ 22576292 (+) True G14541
TU21472 lncRNA upstream 62594 22574923 ~ 22576292 (+) False G14541
TU21471 lncRNA upstream 124949 22512171 ~ 22513937 (+) True G14540
TU21518 lncRNA downstream 2809 22643403 ~ 22670794 (+) False LOC122327931
TU21485 lncRNA downstream 3201 22643795 ~ 22650843 (+) True G14549
TU21543 lncRNA downstream 101833 22742427 ~ 22786013 (+) True G14578
TU21492 lncRNA downstream 135646 22776240 ~ 22777003 (+) True G14553
XR_006252487.1 lncRNA downstream 146127 22786721 ~ 22802473 (+) True LOC122357472
XM_043217616.1 mRNA upstream 37432 22592599 ~ 22601454 (+) True LOC122323627
XM_043256244.1 mRNA upstream 66886 22562512 ~ 22572000 (+) True LOC122357060
XM_043260244.1 mRNA upstream 89019 22521251 ~ 22549867 (+) False epb41l3b
XM_043223672.1 mRNA downstream 18470 22659064 ~ 22665912 (+) True pnp5b
XM_043223680.1 mRNA downstream 18489 22659083 ~ 22665912 (+) False pnp5b
XM_043223664.1 mRNA downstream 18502 22659096 ~ 22665912 (+) False pnp5b
XM_043223631.1 mRNA downstream 26718 22667312 ~ 22674275 (+) False LOC122327931
XM_043223641.1 mRNA downstream 26718 22667312 ~ 22674272 (+) False LOC122327931
unassigned_transcript_253 other upstream 710067 21928747 ~ 21928819 (+) True trnam-cau_1
TU21370 other upstream 777444 21860891 ~ 21861442 (+) True G14471
TU21151 other upstream 922599 21715355 ~ 21716287 (+) False ccl20a.3
TU21079 other upstream 1156568 21481676 ~ 21482318 (+) False LOC122354659
TU21008 other upstream 1277178 21337682 ~ 21361708 (+) False G14211
TU21525 other downstream 50657 22691251 ~ 22695330 (+) True fcer1gl
TU21973 other downstream 904512 23545106 ~ 23547974 (+) True G14831
unassigned_transcript_256 other downstream 1096457 23737051 ~ 23737122 (+) True trnaw-cca_1
XR_006247041.1 other downstream 1295327 23935921 ~ 23938943 (+) True LOC122323670
TU22269 other downstream 1443244 24083838 ~ 24088441 (+) False LOC122327442

Expression Profile