Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043223951.1 |
| length | 1248 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 8 |
| gene id | pdcd10b |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056700.1 |
| NCBI id | CM032069.1 |
| chromosome length | 25613461 |
| location | 17040002 ~ 17044773 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006915 | apoptotic process | biological_process |
| GO:0001525 | angiogenesis | biological_process |
| GO:0003007 | heart morphogenesis | biological_process |
| GO:0009790 | embryo development | biological_process |
| GO:0000139 | Golgi membrane | cellular_component |
| GO:0005886 | plasma membrane | cellular_component |
| id | description |
|---|---|
| K18269 | PDCD10; programmed cell death protein 10 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU18886 | lncRNA | upstream | 61246 | 16950834 ~ 16978756 (+) | False | G12782 |
| TU18885 | lncRNA | upstream | 67464 | 16962728 ~ 16972538 (+) | False | G12782 |
| TU18884 | lncRNA | upstream | 67464 | 16970362 ~ 16972538 (+) | True | G12782 |
| TU18889 | lncRNA | upstream | 72900 | 16958408 ~ 16967102 (+) | True | G12784 |
| TU18875 | lncRNA | upstream | 82743 | 16936932 ~ 16957259 (+) | True | G12776 |
| TU18939 | lncRNA | downstream | 78366 | 17123139 ~ 17123367 (+) | True | G12818 |
| TU18944 | lncRNA | downstream | 88304 | 17133077 ~ 17134888 (+) | True | G12823 |
| TU19158 | lncRNA | downstream | 116403 | 17161176 ~ 17162972 (+) | True | G12972 |
| TU19161 | lncRNA | downstream | 137411 | 17182184 ~ 17270444 (+) | True | G12975 |
| TU19169 | lncRNA | downstream | 142344 | 17187117 ~ 17190607 (+) | True | G12982 |
| XM_043256547.1 | mRNA | upstream | 99 | 17032139 ~ 17039903 (+) | True | golim4b |
| XM_043256557.1 | mRNA | upstream | 99 | 17032139 ~ 17039903 (+) | False | golim4b |
| XM_043256563.1 | mRNA | upstream | 99 | 17032139 ~ 17039903 (+) | False | golim4b |
| XM_043256569.1 | mRNA | upstream | 99 | 17032575 ~ 17039903 (+) | False | golim4b |
| XM_043224682.1 | mRNA | upstream | 10200 | 17025183 ~ 17029802 (+) | True | ptx3b |
| XM_043218488.1 | mRNA | downstream | 49411 | 17094184 ~ 17105967 (+) | False | nrd1a |
| XM_043218479.1 | mRNA | downstream | 49424 | 17094197 ~ 17105967 (+) | True | nrd1a |
| XM_043255953.1 | mRNA | downstream | 64793 | 17109566 ~ 17123064 (+) | True | fam163aa |
| XM_043255971.1 | mRNA | downstream | 64793 | 17109566 ~ 17123064 (+) | False | fam163aa |
| XM_043255961.1 | mRNA | downstream | 64809 | 17109582 ~ 17123064 (+) | False | fam163aa |
| TU18915 | other | upstream | 2705 | 17032319 ~ 17037297 (+) | False | golim4b |
| TU18526 | other | upstream | 771205 | 16267043 ~ 16268797 (+) | True | G12531 |
| XR_006252462.1 | other | upstream | 2257025 | 14776322 ~ 14782977 (+) | False | ackr4a |
| XR_006252465.1 | other | upstream | 2257298 | 14776322 ~ 14782704 (+) | False | ackr4a |
| TU17566 | other | upstream | 2860387 | 14175364 ~ 14179615 (+) | True | G11854 |
| XR_006252905.1 | other | downstream | 317472 | 17362245 ~ 17367861 (+) | False | sppl2 |
| TU19352 | other | downstream | 522068 | 17566841 ~ 17567916 (+) | True | G13114 |
| TU19349 | other | downstream | 562479 | 17607252 ~ 17608092 (+) | True | G13111 |
| XR_006247303.1 | other | downstream | 734566 | 17779339 ~ 17782364 (+) | False | LOC122325453 |
| TU19377 | other | downstream | 739406 | 17784179 ~ 17816764 (+) | True | G13137 |
